Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RHOXF1P1-202ENST00000635473 501 ntBASIC13.52□□□□□ -0.25
SHC1P29353 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.52□□□□□ -0.25
SHC1P29353 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 AC011840.2-201ENST00000563063 1520 ntBASIC13.52□□□□□ -0.25
SHC1P29353 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 AL359881.3-201ENST00000602640 1721 ntBASIC13.52□□□□□ -0.25
SHC1P29353 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.52□□□□□ -0.25
SHC1P29353 AC020910.5-201ENST00000623668 1865 ntBASIC13.52□□□□□ -0.25
SHC1P29353 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.52□□□□□ -0.25
SHC1P29353 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
SHC1P29353 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHC1P29353 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.51□□□□□ -0.25
SHC1P29353 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.51□□□□□ -0.25
SHC1P29353 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 CICP17-201ENST00000418553 2377 ntBASIC13.51□□□□□ -0.25
SHC1P29353 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SHC1P29353 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.51□□□□□ -0.25
SHC1P29353 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SHC1P29353 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.51□□□□□ -0.25
SHC1P29353 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.51□□□□□ -0.25
SHC1P29353 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.51□□□□□ -0.25
SHC1P29353 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.51□□□□□ -0.25
SHC1P29353 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.51□□□□□ -0.25
SHC1P29353 AC003102.2-201ENST00000589195 1469 ntBASIC13.51□□□□□ -0.25
SHC1P29353 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 RN7SKP230-201ENST00000365642 335 ntBASIC13.51□□□□□ -0.25
SHC1P29353 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SHC1P29353 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SHC1P29353 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.51□□□□□ -0.25
SHC1P29353 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.51□□□□□ -0.25
SHC1P29353 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.51□□□□□ -0.25
SHC1P29353 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.51□□□□□ -0.25
SHC1P29353 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 AC106820.3-201ENST00000561653 397 ntBASIC13.51□□□□□ -0.25
SHC1P29353 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.51□□□□□ -0.25
SHC1P29353 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.51□□□□□ -0.25
SHC1P29353 OR10B1P-201ENST00000601666 907 ntBASIC13.51□□□□□ -0.25
SHC1P29353 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.51□□□□□ -0.25
SHC1P29353 AC006453.4-201ENST00000636949 1252 ntBASIC13.51□□□□□ -0.25
SHC1P29353 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.51□□□□□ -0.25
SHC1P29353 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SHC1P29353 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.51□□□□□ -0.25
SHC1P29353 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SHC1P29353 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.51□□□□□ -0.25
SHC1P29353 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SHC1P29353 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.51□□□□□ -0.25
SHC1P29353 AC009093.2-202ENST00000620513 2079 ntBASIC13.51□□□□□ -0.25
SHC1P29353 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHC1P29353 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.5□□□□□ -0.25
SHC1P29353 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.5□□□□□ -0.25
SHC1P29353 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.5□□□□□ -0.25
SHC1P29353 AL354989.2-201ENST00000435838 1540 ntBASIC13.5□□□□□ -0.25
SHC1P29353 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.5□□□□□ -0.25
SHC1P29353 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SHC1P29353 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 MST1P2-201ENST00000457982 2291 ntBASIC13.5□□□□□ -0.25
SHC1P29353 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SHC1P29353 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SHC1P29353 FKBP4P6-201ENST00000457486 1332 ntBASIC13.5□□□□□ -0.25
SHC1P29353 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms