Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL4P13236 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.72□□□□□ -0.21
CCL4P13236 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CCL4P13236 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL4P13236 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL4P13236 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CCL4P13236 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL4P13236 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL4P13236 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CCL4P13236 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
CCL4P13236 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL4P13236 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 HLA-DMA-203ENST00000395305 777 ntBASIC13.71□□□□□ -0.21
CCL4P13236 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL4P13236 OR8T1P-201ENST00000421347 918 ntBASIC13.71□□□□□ -0.21
CCL4P13236 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL4P13236 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL4P13236 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL4P13236 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL4P13236 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.71□□□□□ -0.21
CCL4P13236 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC13.71□□□□□ -0.21
CCL4P13236 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.71□□□□□ -0.21
CCL4P13236 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC13.71□□□□□ -0.21
CCL4P13236 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CCL4P13236 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL4P13236 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL4P13236 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CCL4P13236 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL4P13236 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
CCL4P13236 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL4P13236 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL4P13236 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL4P13236 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL4P13236 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL4P13236 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL4P13236 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL4P13236 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL4P13236 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CCL4P13236 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL4P13236 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.71□□□□□ -0.22
CCL4P13236 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL4P13236 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CCL4P13236 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL4P13236 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CCL4P13236 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL4P13236 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL4P13236 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 BRD7P5-201ENST00000299197 1822 ntBASIC13.7□□□□□ -0.22
CCL4P13236 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL4P13236 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL4P13236 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL4P13236 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL4P13236 CR383656.3-201ENST00000551315 183 ntBASIC13.7□□□□□ -0.22
CCL4P13236 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL4P13236 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 NUDT4P2-201ENST00000578341 546 ntBASIC13.7□□□□□ -0.22
CCL4P13236 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL4P13236 AL132780.4-201ENST00000624870 1135 ntBASIC13.7□□□□□ -0.22
CCL4P13236 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL4P13236 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms