Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.53□□□□□ -0.08
CAPN1P07384 AL138709.1-201ENST00000614840 1693 ntBASIC14.53□□□□□ -0.08
CAPN1P07384 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CAPN1P07384 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CAPN1P07384 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.53□□□□□ -0.08
CAPN1P07384 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.53□□□□□ -0.08
CAPN1P07384 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.53□□□□□ -0.08
CAPN1P07384 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CAPN1P07384 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CAPN1P07384 KLF2P2-201ENST00000416807 1039 ntBASIC14.53□□□□□ -0.08
CAPN1P07384 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.53□□□□□ -0.08
CAPN1P07384 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.53□□□□□ -0.08
CAPN1P07384 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.53□□□□□ -0.08
CAPN1P07384 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
CAPN1P07384 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CAPN1P07384 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CAPN1P07384 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.53□□□□□ -0.08
CAPN1P07384 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.53□□□□□ -0.08
CAPN1P07384 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.53□□□□□ -0.08
CAPN1P07384 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN1P07384 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.53□□□□□ -0.08
CAPN1P07384 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
CAPN1P07384 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
CAPN1P07384 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN1P07384 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CAPN1P07384 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN1P07384 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN1P07384 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.52□□□□□ -0.08
CAPN1P07384 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN1P07384 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.52□□□□□ -0.08
CAPN1P07384 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN1P07384 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.52□□□□□ -0.08
CAPN1P07384 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN1P07384 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN1P07384 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN1P07384 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.52□□□□□ -0.08
CAPN1P07384 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
CAPN1P07384 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN1P07384 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
CAPN1P07384 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.52□□□□□ -0.09
CAPN1P07384 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CAPN1P07384 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPN1P07384 AL355994.2-201ENST00000447882 704 ntBASIC14.52□□□□□ -0.09
CAPN1P07384 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CAPN1P07384 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 AC079316.1-201ENST00000548397 411 ntBASIC14.52□□□□□ -0.09
CAPN1P07384 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPN1P07384 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.52□□□□□ -0.09
CAPN1P07384 AC145423.3-201ENST00000615987 467 ntBASIC14.52□□□□□ -0.09
CAPN1P07384 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.52□□□□□ -0.09
CAPN1P07384 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPN1P07384 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPN1P07384 AL731571.1-201ENST00000617058 5428 ntBASIC14.52□□□□□ -0.09
CAPN1P07384 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 AC005840.4-201ENST00000541242 2494 ntBASIC14.52□□□□□ -0.09
CAPN1P07384 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPN1P07384 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CAPN1P07384 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.52□□□□□ -0.09
CAPN1P07384 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN1P07384 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPN1P07384 AC041040.2-201ENST00000622926 2899 ntBASIC14.52□□□□□ -0.09
CAPN1P07384 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPN1P07384 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.51□□□□□ -0.09
CAPN1P07384 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CAPN1P07384 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms