Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.37□□□□□ -0.43
CD74P04233 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CD74P04233 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD74P04233 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD74P04233 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CD74P04233 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD74P04233 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CD74P04233 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CD74P04233 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CD74P04233 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CD74P04233 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.36□□□□□ -0.43
CD74P04233 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.36□□□□□ -0.43
CD74P04233 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
CD74P04233 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CD74P04233 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.36□□□□□ -0.43
CD74P04233 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.36□□□□□ -0.43
CD74P04233 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.36□□□□□ -0.43
CD74P04233 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.36□□□□□ -0.43
CD74P04233 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.36□□□□□ -0.43
CD74P04233 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.36□□□□□ -0.43
CD74P04233 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.36□□□□□ -0.43
CD74P04233 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 AL512356.2-201ENST00000546955 174 ntBASIC12.36□□□□□ -0.43
CD74P04233 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.36□□□□□ -0.43
CD74P04233 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.36□□□□□ -0.43
CD74P04233 AC044860.1-202ENST00000559481 777 ntBASIC12.36□□□□□ -0.43
CD74P04233 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.36□□□□□ -0.43
CD74P04233 AL596442.2-201ENST00000610240 980 ntBASIC12.36□□□□□ -0.43
CD74P04233 BAP1-211ENST00000615113 489 ntBASIC12.36□□□□□ -0.43
CD74P04233 SPDYE12P-201ENST00000618416 771 ntBASIC12.36□□□□□ -0.43
CD74P04233 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.36□□□□□ -0.43
CD74P04233 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.36□□□□□ -0.43
CD74P04233 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 AGAP12P-201ENST00000585227 2359 ntBASIC12.36□□□□□ -0.43
CD74P04233 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.36□□□□□ -0.43
CD74P04233 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.36□□□□□ -0.43
CD74P04233 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CD74P04233 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 AL138725.1-201ENST00000407347 1314 ntBASIC12.36□□□□□ -0.43
CD74P04233 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD74P04233 AC064801.2-201ENST00000625052 1303 ntBASIC12.36□□□□□ -0.43
CD74P04233 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CD74P04233 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.35□□□□□ -0.43
CD74P04233 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.35□□□□□ -0.43
CD74P04233 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 POM121L14P-201ENST00000406100 1558 ntBASIC12.35□□□□□ -0.43
CD74P04233 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 MIR497HG-202ENST00000572453 3838 ntBASIC12.35□□□□□ -0.43
CD74P04233 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
CD74P04233 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.35□□□□□ -0.43
CD74P04233 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CD74P04233 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD74P04233 MEIS3P1-201ENST00000495167 958 ntBASIC12.35□□□□□ -0.43
CD74P04233 AP000344.2-201ENST00000512987 629 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms