Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.23□□□□□ -0.29
SPTA1P02549 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTA1P02549 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTA1P02549 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SPTA1P02549 RN7SKP230-201ENST00000365642 335 ntBASIC13.23□□□□□ -0.29
SPTA1P02549 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTA1P02549 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC13.23□□□□□ -0.29
SPTA1P02549 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC13.23□□□□□ -0.29
SPTA1P02549 AC098934.1-203ENST00000442868 1262 ntBASIC13.23□□□□□ -0.29
SPTA1P02549 RPL18AP8-201ENST00000486071 528 ntBASIC13.23□□□□□ -0.29
SPTA1P02549 ORAOV1P1-201ENST00000503108 395 ntBASIC13.23□□□□□ -0.29
SPTA1P02549 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC13.23□□□□□ -0.29
SPTA1P02549 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.23□□□□□ -0.29
SPTA1P02549 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.23□□□□□ -0.29
SPTA1P02549 AC015912.3-201ENST00000619432 348 ntBASIC13.23□□□□□ -0.29
SPTA1P02549 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC13.23□□□□□ -0.29
SPTA1P02549 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SPTA1P02549 LINC00528-201ENST00000600723 2160 ntBASIC13.23□□□□□ -0.29
SPTA1P02549 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SPTA1P02549 PCDHA14-201ENST00000506751 2298 ntBASIC13.23□□□□□ -0.29
SPTA1P02549 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTA1P02549 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTA1P02549 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SPTA1P02549 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.23□□□□□ -0.29
SPTA1P02549 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTA1P02549 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SPTA1P02549 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SPTA1P02549 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SPTA1P02549 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC13.23□□□□□ -0.29
SPTA1P02549 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.23□□□□□ -0.29
SPTA1P02549 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTA1P02549 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SPTA1P02549 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTA1P02549 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTA1P02549 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTA1P02549 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SPTA1P02549 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SPTA1P02549 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.23□□□□□ -0.29
SPTA1P02549 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SPTA1P02549 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.23□□□□□ -0.29
SPTA1P02549 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SPTA1P02549 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.22□□□□□ -0.29
SPTA1P02549 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
SPTA1P02549 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC13.22□□□□□ -0.29
SPTA1P02549 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.22□□□□□ -0.29
SPTA1P02549 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.22□□□□□ -0.29
SPTA1P02549 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.22□□□□□ -0.29
SPTA1P02549 HERC2P11-201ENST00000562845 725 ntBASIC13.22□□□□□ -0.29
SPTA1P02549 AC100756.2-201ENST00000569537 736 ntBASIC13.22□□□□□ -0.29
SPTA1P02549 CYP4F36P-201ENST00000589193 186 ntBASIC13.22□□□□□ -0.29
SPTA1P02549 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.22□□□□□ -0.29
SPTA1P02549 PHF23-213ENST00000613632 850 ntTSL 5 BASIC13.22□□□□□ -0.29
SPTA1P02549 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 ZBED1P1-201ENST00000502364 1930 ntBASIC13.22□□□□□ -0.29
SPTA1P02549 WASH7P-201ENST00000488147 1351 ntBASIC13.22□□□□□ -0.29
SPTA1P02549 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.22□□□□□ -0.29
SPTA1P02549 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.22□□□□□ -0.29
SPTA1P02549 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.22□□□□□ -0.29
SPTA1P02549 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.22□□□□□ -0.29
SPTA1P02549 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.22□□□□□ -0.29
SPTA1P02549 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SPTA1P02549 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SPTA1P02549 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
SPTA1P02549 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
SPTA1P02549 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.22□□□□□ -0.29
SPTA1P02549 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.22□□□□□ -0.29
SPTA1P02549 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.22□□□□□ -0.29
SPTA1P02549 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC13.22□□□□□ -0.29
SPTA1P02549 KRT8P1-201ENST00000557533 1207 ntBASIC13.22□□□□□ -0.29
SPTA1P02549 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.22□□□□□ -0.29
SPTA1P02549 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.22□□□□□ -0.29
SPTA1P02549 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.22□□□□□ -0.29
SPTA1P02549 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SPTA1P02549 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 493.1 ms