Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.09■□□□□ 0.17
CD4P01730 RN7SL470P-201ENST00000583069 259 ntBASIC16.09■□□□□ 0.17
CD4P01730 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
CD4P01730 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.09■□□□□ 0.17
CD4P01730 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CD4P01730 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CD4P01730 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.09■□□□□ 0.17
CD4P01730 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CD4P01730 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 LINC01815-202ENST00000641468 1409 ntBASIC16.09■□□□□ 0.17
CD4P01730 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.09■□□□□ 0.17
CD4P01730 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD4P01730 AL590440.2-201ENST00000641973 1595 ntBASIC16.09■□□□□ 0.17
CD4P01730 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CD4P01730 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD4P01730 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.17
CD4P01730 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CD4P01730 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CD4P01730 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CD4P01730 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CD4P01730 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD4P01730 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.08■□□□□ 0.17
CD4P01730 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CD4P01730 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.08■□□□□ 0.17
CD4P01730 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD4P01730 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CD4P01730 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CD4P01730 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.08■□□□□ 0.16
CD4P01730 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.08■□□□□ 0.16
CD4P01730 RN7SL530P-201ENST00000485097 298 ntBASIC16.08■□□□□ 0.16
CD4P01730 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.08■□□□□ 0.16
CD4P01730 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.08■□□□□ 0.16
CD4P01730 CR383656.3-201ENST00000551315 183 ntBASIC16.08■□□□□ 0.16
CD4P01730 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.08■□□□□ 0.16
CD4P01730 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.08■□□□□ 0.16
CD4P01730 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.08■□□□□ 0.16
CD4P01730 MIR5196-201ENST00000578146 115 ntBASIC16.08■□□□□ 0.16
CD4P01730 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CD4P01730 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.08■□□□□ 0.16
CD4P01730 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.08■□□□□ 0.16
CD4P01730 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.08■□□□□ 0.16
CD4P01730 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.08■□□□□ 0.16
CD4P01730 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CD4P01730 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 KRT8P28-201ENST00000433288 1390 ntBASIC16.08■□□□□ 0.16
CD4P01730 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.08■□□□□ 0.16
CD4P01730 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.08■□□□□ 0.16
CD4P01730 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.08■□□□□ 0.16
CD4P01730 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.08■□□□□ 0.16
CD4P01730 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 AC103702.1-201ENST00000548801 2630 ntBASIC16.08■□□□□ 0.16
CD4P01730 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CD4P01730 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CD4P01730 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD4P01730 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.07■□□□□ 0.16
CD4P01730 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD4P01730 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD4P01730 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD4P01730 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD4P01730 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.07■□□□□ 0.16
CD4P01730 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.07■□□□□ 0.16
CD4P01730 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD4P01730 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD4P01730 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CD4P01730 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CD4P01730 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.07■□□□□ 0.16
CD4P01730 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD4P01730 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.07■□□□□ 0.16
CD4P01730 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD4P01730 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CD4P01730 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.07■□□□□ 0.16
CD4P01730 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.07■□□□□ 0.16
CD4P01730 AC004837.1-201ENST00000446267 564 ntBASIC16.07■□□□□ 0.16
CD4P01730 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.07■□□□□ 0.16
CD4P01730 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.07■□□□□ 0.16
CD4P01730 AL022344.2-201ENST00000568976 968 ntBASIC16.07■□□□□ 0.16
CD4P01730 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD4P01730 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.07■□□□□ 0.16
CD4P01730 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms