Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 YBX1P5-201ENST00000509441 847 ntBASIC11.08□□□□□ -0.64
LTAP01374 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.08□□□□□ -0.64
LTAP01374 PGAM5P1-201ENST00000518923 814 ntBASIC11.08□□□□□ -0.64
LTAP01374 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.08□□□□□ -0.64
LTAP01374 AC103988.2-201ENST00000561804 725 ntBASIC11.08□□□□□ -0.64
LTAP01374 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.08□□□□□ -0.64
LTAP01374 KRT18P8-201ENST00000581937 1246 ntBASIC11.08□□□□□ -0.64
LTAP01374 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.08□□□□□ -0.64
LTAP01374 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.08□□□□□ -0.64
LTAP01374 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
LTAP01374 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.08□□□□□ -0.64
LTAP01374 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.08□□□□□ -0.64
LTAP01374 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
LTAP01374 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LTAP01374 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LTAP01374 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
LTAP01374 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC11.08□□□□□ -0.64
LTAP01374 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
LTAP01374 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.07□□□□□ -0.64
LTAP01374 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 AP002761.4-201ENST00000565433 3361 ntBASIC11.07□□□□□ -0.64
LTAP01374 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.07□□□□□ -0.64
LTAP01374 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC11.07□□□□□ -0.64
LTAP01374 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LTAP01374 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.07□□□□□ -0.64
LTAP01374 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.07□□□□□ -0.64
LTAP01374 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 AL139400.1-201ENST00000366220 510 ntBASIC11.07□□□□□ -0.64
LTAP01374 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.07□□□□□ -0.64
LTAP01374 MIR940-201ENST00000401276 94 ntBASIC11.07□□□□□ -0.64
LTAP01374 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.07□□□□□ -0.64
LTAP01374 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC11.07□□□□□ -0.64
LTAP01374 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.07□□□□□ -0.64
LTAP01374 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11.07□□□□□ -0.64
LTAP01374 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.07□□□□□ -0.64
LTAP01374 GCOM2-201ENST00000509133 1104 ntBASIC11.07□□□□□ -0.64
LTAP01374 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.07□□□□□ -0.64
LTAP01374 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.07□□□□□ -0.64
LTAP01374 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.07□□□□□ -0.64
LTAP01374 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
LTAP01374 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.07□□□□□ -0.64
LTAP01374 AC138761.1-201ENST00000584393 385 ntBASIC11.07□□□□□ -0.64
LTAP01374 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.07□□□□□ -0.64
LTAP01374 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 AL049840.4-201ENST00000602422 811 ntBASIC11.07□□□□□ -0.64
LTAP01374 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.07□□□□□ -0.64
LTAP01374 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LTAP01374 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LTAP01374 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LTAP01374 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms