Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CTNND1O60716 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CTNND1O60716 Z69890.1-201ENST00000382990 339 ntBASIC17.03■□□□□ 0.32
CTNND1O60716 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.03■□□□□ 0.32
CTNND1O60716 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.03■□□□□ 0.32
CTNND1O60716 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.03■□□□□ 0.32
CTNND1O60716 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.03■□□□□ 0.32
CTNND1O60716 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.03■□□□□ 0.32
CTNND1O60716 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 KRT8P1-201ENST00000557533 1207 ntBASIC17.03■□□□□ 0.32
CTNND1O60716 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.03■□□□□ 0.32
CTNND1O60716 AC084781.1-201ENST00000613737 656 ntBASIC17.03■□□□□ 0.32
CTNND1O60716 MIR6858-201ENST00000620733 67 ntBASIC17.03■□□□□ 0.32
CTNND1O60716 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CTNND1O60716 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CTNND1O60716 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.03■□□□□ 0.32
CTNND1O60716 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CTNND1O60716 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CTNND1O60716 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CTNND1O60716 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
CTNND1O60716 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNND1O60716 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.02■□□□□ 0.32
CTNND1O60716 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CTNND1O60716 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNND1O60716 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNND1O60716 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CTNND1O60716 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNND1O60716 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNND1O60716 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNND1O60716 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.02■□□□□ 0.32
CTNND1O60716 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.02■□□□□ 0.32
CTNND1O60716 AC022532.1-201ENST00000624563 1728 ntBASIC17.02■□□□□ 0.32
CTNND1O60716 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.02■□□□□ 0.32
CTNND1O60716 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNND1O60716 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNND1O60716 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.02■□□□□ 0.32
CTNND1O60716 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CTNND1O60716 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CTNND1O60716 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.02■□□□□ 0.32
CTNND1O60716 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNND1O60716 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNND1O60716 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CTNND1O60716 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
CTNND1O60716 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CTNND1O60716 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.02■□□□□ 0.32
CTNND1O60716 IGHV3-37-201ENST00000518544 340 ntBASIC17.02■□□□□ 0.32
CTNND1O60716 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CTNND1O60716 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CTNND1O60716 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CTNND1O60716 AL591471.1-201ENST00000621855 229 ntBASIC17.02■□□□□ 0.32
CTNND1O60716 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CTNND1O60716 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.02■□□□□ 0.32
CTNND1O60716 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CTNND1O60716 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.02■□□□□ 0.31
CTNND1O60716 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CTNND1O60716 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTNND1O60716 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTNND1O60716 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTNND1O60716 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
CTNND1O60716 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTNND1O60716 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CTNND1O60716 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CTNND1O60716 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CTNND1O60716 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTNND1O60716 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CTNND1O60716 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CTNND1O60716 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
CTNND1O60716 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.01■□□□□ 0.31
CTNND1O60716 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 TNRC18P2-201ENST00000417666 2714 ntBASIC17.01■□□□□ 0.31
CTNND1O60716 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CTNND1O60716 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.01■□□□□ 0.31
CTNND1O60716 AC068587.6-202ENST00000641839 5619 ntBASIC17.01■□□□□ 0.31
CTNND1O60716 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.01■□□□□ 0.31
CTNND1O60716 AC015688.4-201ENST00000580780 1647 ntBASIC17.01■□□□□ 0.31
CTNND1O60716 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CTNND1O60716 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.01■□□□□ 0.31
CTNND1O60716 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.01■□□□□ 0.31
CTNND1O60716 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CTNND1O60716 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms