Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SLC28A1O00337 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC28A1O00337 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLC28A1O00337 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 MSTO2P-201ENST00000314835 1709 ntBASIC14.15□□□□□ -0.14
SLC28A1O00337 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SLC28A1O00337 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC28A1O00337 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SLC28A1O00337 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
SLC28A1O00337 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC28A1O00337 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SLC28A1O00337 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SLC28A1O00337 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC28A1O00337 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 MIR661-201ENST00000384842 89 ntBASIC14.15□□□□□ -0.14
SLC28A1O00337 RN7SKP175-201ENST00000408472 289 ntBASIC14.15□□□□□ -0.14
SLC28A1O00337 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.15□□□□□ -0.14
SLC28A1O00337 AC002472.2-201ENST00000442739 958 ntBASIC14.15□□□□□ -0.14
SLC28A1O00337 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.15□□□□□ -0.14
SLC28A1O00337 AL391280.1-201ENST00000506969 1062 ntBASIC14.15□□□□□ -0.14
SLC28A1O00337 AC068587.3-201ENST00000526613 355 ntBASIC14.15□□□□□ -0.14
SLC28A1O00337 TDH-203ENST00000531764 1110 ntBASIC14.15□□□□□ -0.14
SLC28A1O00337 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 TP53TG3HP-202ENST00000569755 579 ntBASIC14.15□□□□□ -0.14
SLC28A1O00337 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC28A1O00337 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SLC28A1O00337 AL096865.1-201ENST00000606796 927 ntBASIC14.15□□□□□ -0.14
SLC28A1O00337 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC28A1O00337 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SLC28A1O00337 DMBT1P1-203ENST00000636837 4628 ntBASIC14.15□□□□□ -0.14
SLC28A1O00337 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC28A1O00337 PEG13-201ENST00000631594 5667 ntBASIC14.15□□□□□ -0.14
SLC28A1O00337 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLC28A1O00337 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLC28A1O00337 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC28A1O00337 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SLC28A1O00337 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC28A1O00337 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SLC28A1O00337 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.15□□□□□ -0.15
SLC28A1O00337 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SLC28A1O00337 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC28A1O00337 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SLC28A1O00337 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC28A1O00337 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC28A1O00337 AC090643.2-201ENST00000623442 2029 ntBASIC14.14□□□□□ -0.15
SLC28A1O00337 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.14□□□□□ -0.15
SLC28A1O00337 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
SLC28A1O00337 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SLC28A1O00337 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SLC28A1O00337 AC236430.1-201ENST00000402231 743 ntBASIC14.14□□□□□ -0.15
SLC28A1O00337 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SLC28A1O00337 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SLC28A1O00337 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.14□□□□□ -0.15
SLC28A1O00337 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.14□□□□□ -0.15
SLC28A1O00337 AC190387.1-201ENST00000551683 408 ntBASIC14.14□□□□□ -0.15
SLC28A1O00337 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC28A1O00337 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.14□□□□□ -0.15
SLC28A1O00337 AC027796.2-201ENST00000575326 344 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 304.2 ms