Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 MIR600HG-201ENST00000449175 5984 ntBASIC12.93□□□□□ -0.34
NPIPB4C9JG80 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 AC244394.1-201ENST00000435000 1665 ntBASIC12.93□□□□□ -0.34
NPIPB4C9JG80 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 AC097376.2-205ENST00000610159 5334 ntBASIC12.93□□□□□ -0.34
NPIPB4C9JG80 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 KRT18P8-201ENST00000581937 1246 ntBASIC12.93□□□□□ -0.34
NPIPB4C9JG80 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 AC021016.3-201ENST00000608367 477 ntBASIC12.93□□□□□ -0.34
NPIPB4C9JG80 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 Z98259.2-201ENST00000641583 609 ntBASIC12.93□□□□□ -0.34
NPIPB4C9JG80 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPB4C9JG80 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 U91328.1-201ENST00000437528 223 ntBASIC12.92□□□□□ -0.34
NPIPB4C9JG80 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 MIR4783-201ENST00000580343 82 ntBASIC12.92□□□□□ -0.34
NPIPB4C9JG80 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 AP000346.4-201ENST00000614827 381 ntBASIC12.92□□□□□ -0.34
NPIPB4C9JG80 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 AC090386.2-201ENST00000623010 1039 ntBASIC12.92□□□□□ -0.34
NPIPB4C9JG80 AL162426.1-201ENST00000624141 743 ntBASIC12.92□□□□□ -0.34
NPIPB4C9JG80 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NPIPB4C9JG80 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms