Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 AC097359.2-201ENST00000604992 2389 ntBASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 KRT43P-201ENST00000434019 910 ntBASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 AL596325.1-201ENST00000563991 1082 ntBASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 GNRHR2-203ENST00000581100 1187 ntBASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 AC097655.1-201ENST00000635075 318 ntBASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 AL590396.2-201ENST00000636511 1041 ntBASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 HSPA7-201ENST00000445535 1927 ntBASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 AC015688.4-201ENST00000580780 1647 ntBASIC14.74□□□□□ -0.05
VPS9D1Q9Y2B5 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 AC092933.1-201ENST00000393644 945 ntBASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 RN7SKP175-201ENST00000408472 289 ntBASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 AC016694.1-201ENST00000434179 700 ntBASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 INE1-201ENST00000456273 945 ntBASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 USP32P1-208ENST00000506594 1164 ntBASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 BTNL10-201ENST00000595971 695 ntBASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS9D1Q9Y2B5 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms