Protein–RNA interactions for Protein: Q9UJ99

CDH22, Cadherin-22, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22Q9UJ99 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 AC015909.3-201ENST00000572855 1794 ntBASIC15.55■□□□□ 0.08
CDH22Q9UJ99 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 AC012441.2-201ENST00000444843 739 ntBASIC15.55■□□□□ 0.08
CDH22Q9UJ99 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 RPL17P45-201ENST00000586289 509 ntBASIC15.55■□□□□ 0.08
CDH22Q9UJ99 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 AC127024.7-201ENST00000625101 200 ntBASIC15.55■□□□□ 0.08
CDH22Q9UJ99 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH22Q9UJ99 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 AL138725.1-201ENST00000407347 1314 ntBASIC15.54■□□□□ 0.08
CDH22Q9UJ99 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 AC078875.1-201ENST00000431907 724 ntBASIC15.54■□□□□ 0.08
CDH22Q9UJ99 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 POU5F1P2-201ENST00000521750 823 ntBASIC15.54■□□□□ 0.08
CDH22Q9UJ99 AP002803.1-201ENST00000528836 498 ntBASIC15.54■□□□□ 0.08
CDH22Q9UJ99 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 MIR6720-201ENST00000611664 98 ntBASIC15.54■□□□□ 0.08
CDH22Q9UJ99 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH22Q9UJ99 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH22Q9UJ99 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH22Q9UJ99 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH22Q9UJ99 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH22Q9UJ99 AGAP7P-201ENST00000582299 2062 ntBASIC15.53■□□□□ 0.08
CDH22Q9UJ99 AGAP14-201ENST00000624701 2060 ntBASIC15.53■□□□□ 0.08
CDH22Q9UJ99 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms