Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 AQP7P5-201ENST00000428759 1049 ntBASIC18.28■□□□□ 0.52
SCN11AQ9UI33 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 AQP7P4-201ENST00000447083 1042 ntBASIC18.28■□□□□ 0.52
SCN11AQ9UI33 GNG10P1-201ENST00000452289 199 ntBASIC18.28■□□□□ 0.52
SCN11AQ9UI33 AQP7P2-201ENST00000453967 1041 ntBASIC18.28■□□□□ 0.52
SCN11AQ9UI33 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 CD81-209ENST00000492627 886 ntTSL 3 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 AC010234.1-201ENST00000494599 870 ntBASIC18.28■□□□□ 0.52
SCN11AQ9UI33 ALG1L3P-201ENST00000503331 765 ntBASIC18.28■□□□□ 0.52
SCN11AQ9UI33 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 FOXN3-AS2-201ENST00000554071 1262 ntBASIC18.28■□□□□ 0.52
SCN11AQ9UI33 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 AC008972.2-201ENST00000606587 494 ntBASIC18.28■□□□□ 0.52
SCN11AQ9UI33 AL359091.4-201ENST00000610052 409 ntBASIC18.28■□□□□ 0.52
SCN11AQ9UI33 AQP7P3-201ENST00000624547 1041 ntBASIC18.28■□□□□ 0.52
SCN11AQ9UI33 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 AC020910.6-201ENST00000623084 1459 ntBASIC18.28■□□□□ 0.52
SCN11AQ9UI33 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 AC144831.1-201ENST00000573312 2656 ntBASIC18.28■□□□□ 0.52
SCN11AQ9UI33 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN11AQ9UI33 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 IDS-203ENST00000428056 1213 ntTSL 2 BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 ALG1L7P-201ENST00000502317 768 ntBASIC18.27■□□□□ 0.52
SCN11AQ9UI33 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 AP005264.6-204ENST00000588436 719 ntBASIC18.27■□□□□ 0.52
SCN11AQ9UI33 AL049840.2-201ENST00000602722 535 ntBASIC18.27■□□□□ 0.52
SCN11AQ9UI33 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 AC012617.1-204ENST00000586340 2305 ntBASIC18.27■□□□□ 0.52
SCN11AQ9UI33 RPL13AP3-202ENST00000494676 1473 ntBASIC18.27■□□□□ 0.52
SCN11AQ9UI33 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 AC015802.1-201ENST00000588104 1449 ntBASIC18.27■□□□□ 0.52
SCN11AQ9UI33 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC18.27■□□□□ 0.52
SCN11AQ9UI33 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 AC024293.1-201ENST00000467930 498 ntBASIC18.27■□□□□ 0.51
SCN11AQ9UI33 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 THY1-209ENST00000580275 578 ntTSL 3 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 RARS-210ENST00000626454 177 ntTSL 5 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SCN11AQ9UI33 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 GEMIN8P4-201ENST00000380526 729 ntBASIC18.26■□□□□ 0.51
SCN11AQ9UI33 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 KRT18P37-201ENST00000520711 1282 ntBASIC18.26■□□□□ 0.51
SCN11AQ9UI33 DLK1-205ENST00000556051 469 ntTSL 2 BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 AC002472.4-201ENST00000641915 272 ntBASIC18.26■□□□□ 0.51
SCN11AQ9UI33 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SCN11AQ9UI33 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms