Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CISHQ9NSE2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CISHQ9NSE2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CISHQ9NSE2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CISHQ9NSE2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CISHQ9NSE2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 REXO1L6P-201ENST00000603433 1515 ntBASIC15.62■□□□□ 0.09
CISHQ9NSE2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CISHQ9NSE2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CISHQ9NSE2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.62■□□□□ 0.09
CISHQ9NSE2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 LINC01230-201ENST00000625222 3017 ntBASIC15.61■□□□□ 0.09
CISHQ9NSE2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 HSPA7-201ENST00000445535 1927 ntBASIC15.61■□□□□ 0.09
CISHQ9NSE2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 MIR1908-201ENST00000410394 80 ntBASIC15.61■□□□□ 0.09
CISHQ9NSE2 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.61■□□□□ 0.09
CISHQ9NSE2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 AC021723.1-201ENST00000486306 515 ntBASIC15.61■□□□□ 0.09
CISHQ9NSE2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 AC009884.2-201ENST00000603110 324 ntBASIC15.61■□□□□ 0.09
CISHQ9NSE2 AC091271.1-201ENST00000611877 1162 ntBASIC15.61■□□□□ 0.09
CISHQ9NSE2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CISHQ9NSE2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CISHQ9NSE2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 RBM8B-201ENST00000555532 525 ntBASIC15.6■□□□□ 0.09
CISHQ9NSE2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 AC005962.1-201ENST00000584100 773 ntBASIC15.6■□□□□ 0.09
CISHQ9NSE2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CISHQ9NSE2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CISHQ9NSE2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms