Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC106827.1-201ENST00000366454 431 ntBASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 OR52M2P-201ENST00000414298 959 ntBASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 PPP1R2P4-201ENST00000424051 595 ntBASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 AC023906.1-201ENST00000486386 453 ntBASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 KLF17P1-201ENST00000547105 1126 ntBASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.1
TRIM43Q96BQ3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRIM43Q96BQ3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.64■□□□□ 0.1
TRIM43Q96BQ3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 OR7E115P-201ENST00000382617 1024 ntBASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 AC019109.1-201ENST00000401725 1874 ntBASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 CHCHD2P2-201ENST00000503744 321 ntBASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 AC023968.2-201ENST00000560593 1049 ntBASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 AP005264.5-201ENST00000590066 467 ntBASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 APOC1-209ENST00000592885 562 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 AL359091.4-201ENST00000610052 409 ntBASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 AC091769.1-201ENST00000619576 568 ntBASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM43Q96BQ3 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 CTSL-202ENST00000342020 933 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM43Q96BQ3 AC092570.1-201ENST00000414446 469 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms