Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 MIR1233-2-201ENST00000408138 82 ntBASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 MIR1233-1-201ENST00000408722 82 ntBASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 RN7SL618P-201ENST00000477850 296 ntBASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 AC138761.1-201ENST00000584393 385 ntBASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 AC107373.2-201ENST00000607735 490 ntBASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 AL158212.4-201ENST00000624062 1286 ntBASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 AL513210.1-201ENST00000629608 234 ntBASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CKAP2Q8WWK9 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 POM121L14P-201ENST00000406100 1558 ntBASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 AL391647.1-201ENST00000395664 511 ntBASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 AL139094.1-201ENST00000405549 1188 ntBASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 DNAJB3-201ENST00000446806 729 ntBASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 AC026410.3-201ENST00000514280 936 ntBASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CKAP2Q8WWK9 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CKAP2Q8WWK9 AC125807.2-201ENST00000513358 3514 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms