Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL645933.1-201ENST00000440087 609 ntBASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 FTLP1-201ENST00000449155 526 ntBASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 AC073150.1-201ENST00000450406 1084 ntBASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 AL353637.1-201ENST00000451571 732 ntBASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 RTN3P1-201ENST00000536295 711 ntBASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SHKBP1Q8TBC3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 MPRIPP1-201ENST00000452433 1089 ntBASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 CEP164P1-201ENST00000455142 418 ntBASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 RPS2P36-201ENST00000456516 831 ntBASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 AC012044.1-201ENST00000603431 297 ntBASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 AL353726.2-201ENST00000623259 884 ntBASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 CICP14-201ENST00000629111 2732 ntBASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.4■□□□□ 0.06
SHKBP1Q8TBC3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 AC006122.1-201ENST00000493323 440 ntBASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 AC242376.1-201ENST00000559033 726 ntBASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 MIR4754-201ENST00000582477 89 ntBASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 SPCS2P2-201ENST00000603270 608 ntBASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 AL157813.1-201ENST00000612996 587 ntBASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms