Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 CD37-203ENST00000426897 1204 ntTSL 2 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 AL954722.1-201ENST00000431238 259 ntBASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 HNRNPA3P12-201ENST00000437410 1063 ntBASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 NAT9-219ENST00000582524 573 ntTSL 4 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
COL22A1Q8NFW1 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL22A1Q8NFW1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 USP39-220ENST00000613444 2161 ntTSL 2 BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 RN7SL478P-201ENST00000584358 298 ntBASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 MIR6074-201ENST00000612054 107 ntBASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 AL121753.2-201ENST00000624581 1461 ntBASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 AC232323.1-201ENST00000540724 2099 ntBASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.76■□□□□ 0.59
COL22A1Q8NFW1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 AC015818.1-201ENST00000451011 244 ntBASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 CETN3-205ENST00000522842 664 ntTSL 2 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 AC010202.1-201ENST00000551181 405 ntBASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 TPST2P1-201ENST00000564073 1102 ntBASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 AL590556.2-202ENST00000636906 844 ntBASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 LINC02199-201ENST00000506655 2702 ntBASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 RPL4P6-201ENST00000438116 1304 ntBASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 AL137077.2-201ENST00000635124 1608 ntBASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL22A1Q8NFW1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.74■□□□□ 0.59
COL22A1Q8NFW1 CCL19-202ENST00000378800 414 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms