Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AP001542.1-201ENST00000591314 200 ntBASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AC009955.4-201ENST00000597192 544 ntBASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 AC117489.1-201ENST00000625169 3217 ntBASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 KRT8P28-201ENST00000433288 1390 ntBASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SCUBE3Q8IX30 FAM45BP-202ENST00000592932 1624 ntBASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 AC026748.1-201ENST00000624349 3251 ntBASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 BRWD1P1-201ENST00000401091 371 ntBASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 AC132192.2-201ENST00000596206 1147 ntBASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 AC244093.1-201ENST00000610837 814 ntBASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 AL096828.3-201ENST00000615354 462 ntBASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
SCUBE3Q8IX30 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SCUBE3Q8IX30 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SCUBE3Q8IX30 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
SCUBE3Q8IX30 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.46■□□□□ 0.06
SCUBE3Q8IX30 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
SCUBE3Q8IX30 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
SCUBE3Q8IX30 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SCUBE3Q8IX30 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SCUBE3Q8IX30 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SCUBE3Q8IX30 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 AC244394.1-201ENST00000435000 1665 ntBASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 AL354877.1-201ENST00000424412 413 ntBASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 HSPB1P2-201ENST00000448722 546 ntBASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.45■□□□□ 0.06
SCUBE3Q8IX30 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms