Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.97□□□□□ -0.17
RIF1Q5UIP0 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 GH1-203ENST00000351388 685 ntTSL 2 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 ST13P19-201ENST00000442505 1124 ntBASIC13.97□□□□□ -0.17
RIF1Q5UIP0 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.97□□□□□ -0.17
RIF1Q5UIP0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 RPL13AP3-202ENST00000494676 1473 ntBASIC13.97□□□□□ -0.17
RIF1Q5UIP0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 U73169.1-201ENST00000395152 367 ntBASIC13.97□□□□□ -0.17
RIF1Q5UIP0 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 RPL18AP15-201ENST00000430258 517 ntBASIC13.97□□□□□ -0.17
RIF1Q5UIP0 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 RN7SL340P-201ENST00000470792 296 ntBASIC13.97□□□□□ -0.17
RIF1Q5UIP0 RN7SL375P-201ENST00000492442 298 ntBASIC13.97□□□□□ -0.17
RIF1Q5UIP0 RPSAP70-201ENST00000504462 864 ntBASIC13.97□□□□□ -0.17
RIF1Q5UIP0 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 BX322534.1-201ENST00000635574 241 ntBASIC13.97□□□□□ -0.17
RIF1Q5UIP0 AC215524.1-201ENST00000635696 241 ntBASIC13.97□□□□□ -0.17
RIF1Q5UIP0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RIF1Q5UIP0 AC138932.1-201ENST00000534164 6830 ntBASIC13.97□□□□□ -0.17
RIF1Q5UIP0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 RN7SL363P-201ENST00000482412 273 ntBASIC13.96□□□□□ -0.17
RIF1Q5UIP0 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RIF1Q5UIP0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.96□□□□□ -0.18
RIF1Q5UIP0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms