Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.83■□□□□ 0.13
TRIM71Q2Q1W2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 AC004837.1-201ENST00000446267 564 ntBASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 DPY19L2P5-201ENST00000456300 331 ntBASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 ALG1L6P-201ENST00000515248 758 ntBASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 RNA5SP417-201ENST00000516459 108 ntBASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 AC138701.2-201ENST00000553634 226 ntBASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 MIR2392-201ENST00000584881 84 ntBASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM71Q2Q1W2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 ALG1L13P-202ENST00000519320 584 ntBASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 MIR600HG-201ENST00000449175 5984 ntBASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM71Q2Q1W2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 BAK1P1-201ENST00000317045 636 ntBASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM71Q2Q1W2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms