Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 NAP1L6-202ENST00000641404 1222 ntBASIC12.52□□□□□ -0.41
EFNB3Q15768 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
EFNB3Q15768 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.52□□□□□ -0.41
EFNB3Q15768 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
EFNB3Q15768 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB3Q15768 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB3Q15768 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB3Q15768 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
EFNB3Q15768 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.52□□□□□ -0.41
EFNB3Q15768 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
EFNB3Q15768 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
EFNB3Q15768 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB3Q15768 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
EFNB3Q15768 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
EFNB3Q15768 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
EFNB3Q15768 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
EFNB3Q15768 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.51□□□□□ -0.41
EFNB3Q15768 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
EFNB3Q15768 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
EFNB3Q15768 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.51□□□□□ -0.41
EFNB3Q15768 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.51□□□□□ -0.41
EFNB3Q15768 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.51□□□□□ -0.41
EFNB3Q15768 AC006335.1-201ENST00000445200 547 ntBASIC12.51□□□□□ -0.41
EFNB3Q15768 AL133466.1-201ENST00000447582 150 ntBASIC12.51□□□□□ -0.41
EFNB3Q15768 AC024681.1-201ENST00000521917 487 ntBASIC12.51□□□□□ -0.41
EFNB3Q15768 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.51□□□□□ -0.41
EFNB3Q15768 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.51□□□□□ -0.41
EFNB3Q15768 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.51□□□□□ -0.41
EFNB3Q15768 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.51□□□□□ -0.41
EFNB3Q15768 AC091812.3-201ENST00000621362 345 ntBASIC12.51□□□□□ -0.41
EFNB3Q15768 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
EFNB3Q15768 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
EFNB3Q15768 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
EFNB3Q15768 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.51□□□□□ -0.41
EFNB3Q15768 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
EFNB3Q15768 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 AC097376.2-205ENST00000610159 5334 ntBASIC12.51□□□□□ -0.41
EFNB3Q15768 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB3Q15768 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.5□□□□□ -0.41
EFNB3Q15768 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
EFNB3Q15768 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.5□□□□□ -0.41
EFNB3Q15768 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
EFNB3Q15768 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.5□□□□□ -0.41
EFNB3Q15768 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
EFNB3Q15768 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
EFNB3Q15768 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.5□□□□□ -0.41
EFNB3Q15768 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.5□□□□□ -0.41
EFNB3Q15768 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
EFNB3Q15768 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.5□□□□□ -0.41
EFNB3Q15768 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.5□□□□□ -0.41
EFNB3Q15768 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.5□□□□□ -0.41
EFNB3Q15768 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.5□□□□□ -0.41
EFNB3Q15768 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.5□□□□□ -0.41
EFNB3Q15768 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
EFNB3Q15768 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.5□□□□□ -0.41
EFNB3Q15768 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
EFNB3Q15768 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.5□□□□□ -0.41
EFNB3Q15768 AL021578.1-201ENST00000613646 709 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms