Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
KCNA1Q09470 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.11■□□□□ 0.17
KCNA1Q09470 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.11■□□□□ 0.17
KCNA1Q09470 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
KCNA1Q09470 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
KCNA1Q09470 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.11■□□□□ 0.17
KCNA1Q09470 AL354877.1-201ENST00000424412 413 ntBASIC16.11■□□□□ 0.17
KCNA1Q09470 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.11■□□□□ 0.17
KCNA1Q09470 AL645933.1-201ENST00000440087 609 ntBASIC16.11■□□□□ 0.17
KCNA1Q09470 MTX1P1-201ENST00000440904 838 ntBASIC16.11■□□□□ 0.17
KCNA1Q09470 Z93015.1-201ENST00000451718 390 ntBASIC16.11■□□□□ 0.17
KCNA1Q09470 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.11■□□□□ 0.17
KCNA1Q09470 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.11■□□□□ 0.17
KCNA1Q09470 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.11■□□□□ 0.17
KCNA1Q09470 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.11■□□□□ 0.17
KCNA1Q09470 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.11■□□□□ 0.17
KCNA1Q09470 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.11■□□□□ 0.17
KCNA1Q09470 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.11■□□□□ 0.17
KCNA1Q09470 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
KCNA1Q09470 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.11■□□□□ 0.17
KCNA1Q09470 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
KCNA1Q09470 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.11■□□□□ 0.17
KCNA1Q09470 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.11■□□□□ 0.17
KCNA1Q09470 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KCNA1Q09470 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KCNA1Q09470 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNA1Q09470 REXO1L6P-201ENST00000603433 1515 ntBASIC16.1■□□□□ 0.17
KCNA1Q09470 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNA1Q09470 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNA1Q09470 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.1■□□□□ 0.17
KCNA1Q09470 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KCNA1Q09470 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
KCNA1Q09470 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.1■□□□□ 0.17
KCNA1Q09470 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
KCNA1Q09470 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.1■□□□□ 0.17
KCNA1Q09470 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNA1Q09470 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNA1Q09470 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.1■□□□□ 0.17
KCNA1Q09470 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.1■□□□□ 0.17
KCNA1Q09470 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.1■□□□□ 0.17
KCNA1Q09470 SORD2P-201ENST00000558556 1069 ntBASIC16.1■□□□□ 0.17
KCNA1Q09470 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNA1Q09470 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KCNA1Q09470 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KCNA1Q09470 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.1■□□□□ 0.17
KCNA1Q09470 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KCNA1Q09470 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KCNA1Q09470 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNA1Q09470 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
KCNA1Q09470 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNA1Q09470 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNA1Q09470 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KCNA1Q09470 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNA1Q09470 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KCNA1Q09470 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNA1Q09470 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KCNA1Q09470 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.1■□□□□ 0.17
KCNA1Q09470 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KCNA1Q09470 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.1■□□□□ 0.17
KCNA1Q09470 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KCNA1Q09470 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KCNA1Q09470 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KCNA1Q09470 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
KCNA1Q09470 AC018735.1-201ENST00000437208 1502 ntBASIC16.09■□□□□ 0.17
KCNA1Q09470 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.09■□□□□ 0.17
KCNA1Q09470 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
KCNA1Q09470 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KCNA1Q09470 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
KCNA1Q09470 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KCNA1Q09470 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KCNA1Q09470 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KCNA1Q09470 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.09■□□□□ 0.17
KCNA1Q09470 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
KCNA1Q09470 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
KCNA1Q09470 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.09■□□□□ 0.17
KCNA1Q09470 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KCNA1Q09470 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KCNA1Q09470 MIR1908-201ENST00000410394 80 ntBASIC16.09■□□□□ 0.17
KCNA1Q09470 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.09■□□□□ 0.17
KCNA1Q09470 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.09■□□□□ 0.17
KCNA1Q09470 AL157407.1-201ENST00000435784 904 ntBASIC16.09■□□□□ 0.17
KCNA1Q09470 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
KCNA1Q09470 AL035414.1-201ENST00000451327 857 ntBASIC16.09■□□□□ 0.17
KCNA1Q09470 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.09■□□□□ 0.17
KCNA1Q09470 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.09■□□□□ 0.17
KCNA1Q09470 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms