Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.72□□□□□ -0.21
CD47Q08722 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.72□□□□□ -0.21
CD47Q08722 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
CD47Q08722 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.72□□□□□ -0.21
CD47Q08722 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.72□□□□□ -0.21
CD47Q08722 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.72□□□□□ -0.21
CD47Q08722 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CD47Q08722 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.72□□□□□ -0.21
CD47Q08722 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.72□□□□□ -0.21
CD47Q08722 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.71□□□□□ -0.21
CD47Q08722 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CD47Q08722 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.71□□□□□ -0.21
CD47Q08722 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CD47Q08722 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CD47Q08722 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.71□□□□□ -0.21
CD47Q08722 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CD47Q08722 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CD47Q08722 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.71□□□□□ -0.21
CD47Q08722 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.71□□□□□ -0.21
CD47Q08722 PMS2P2-201ENST00000425039 1128 ntBASIC13.71□□□□□ -0.21
CD47Q08722 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.71□□□□□ -0.21
CD47Q08722 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.71□□□□□ -0.21
CD47Q08722 AL589987.1-201ENST00000453380 819 ntBASIC13.71□□□□□ -0.21
CD47Q08722 AC092183.1-201ENST00000469884 875 ntBASIC13.71□□□□□ -0.21
CD47Q08722 RFPL4AP1-201ENST00000530883 850 ntBASIC13.71□□□□□ -0.21
CD47Q08722 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.71□□□□□ -0.21
CD47Q08722 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.71□□□□□ -0.21
CD47Q08722 AL390955.2-201ENST00000603032 514 ntBASIC13.71□□□□□ -0.21
CD47Q08722 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.71□□□□□ -0.21
CD47Q08722 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CD47Q08722 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.71□□□□□ -0.21
CD47Q08722 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.71□□□□□ -0.21
CD47Q08722 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD47Q08722 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
CD47Q08722 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD47Q08722 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.71□□□□□ -0.22
CD47Q08722 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.71□□□□□ -0.22
CD47Q08722 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CD47Q08722 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD47Q08722 AC090643.2-201ENST00000623442 2029 ntBASIC13.71□□□□□ -0.22
CD47Q08722 BEND3P3-201ENST00000611030 2440 ntBASIC13.71□□□□□ -0.22
CD47Q08722 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD47Q08722 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD47Q08722 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.71□□□□□ -0.22
CD47Q08722 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD47Q08722 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.71□□□□□ -0.22
CD47Q08722 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CD47Q08722 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD47Q08722 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CD47Q08722 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.71□□□□□ -0.22
CD47Q08722 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
CD47Q08722 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD47Q08722 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CD47Q08722 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD47Q08722 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.7□□□□□ -0.22
CD47Q08722 MIR497HG-202ENST00000572453 3838 ntBASIC13.7□□□□□ -0.22
CD47Q08722 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD47Q08722 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD47Q08722 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.7□□□□□ -0.22
CD47Q08722 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.7□□□□□ -0.22
CD47Q08722 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD47Q08722 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD47Q08722 AGAP10P-201ENST00000454844 2418 ntBASIC13.7□□□□□ -0.22
CD47Q08722 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CD47Q08722 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.7□□□□□ -0.22
CD47Q08722 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CD47Q08722 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD47Q08722 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CD47Q08722 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.7□□□□□ -0.22
CD47Q08722 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD47Q08722 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD47Q08722 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.7□□□□□ -0.22
CD47Q08722 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.7□□□□□ -0.22
CD47Q08722 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CD47Q08722 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms