Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCNA1P78396 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCNA1P78396 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCNA1P78396 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CCNA1P78396 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.53■□□□□ 0.24
CCNA1P78396 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCNA1P78396 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
CCNA1P78396 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCNA1P78396 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
CCNA1P78396 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCNA1P78396 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCNA1P78396 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCNA1P78396 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CCNA1P78396 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCNA1P78396 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCNA1P78396 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCNA1P78396 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCNA1P78396 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCNA1P78396 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.52■□□□□ 0.24
CCNA1P78396 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.52■□□□□ 0.24
CCNA1P78396 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.52■□□□□ 0.24
CCNA1P78396 AC008741.2-201ENST00000612792 3115 ntBASIC16.52■□□□□ 0.24
CCNA1P78396 AC007950.2-201ENST00000615045 2347 ntBASIC16.52■□□□□ 0.24
CCNA1P78396 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.52■□□□□ 0.24
CCNA1P78396 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.52■□□□□ 0.24
CCNA1P78396 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCNA1P78396 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.52■□□□□ 0.24
CCNA1P78396 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.52■□□□□ 0.24
CCNA1P78396 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CCNA1P78396 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.52■□□□□ 0.24
CCNA1P78396 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CCNA1P78396 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCNA1P78396 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCNA1P78396 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCNA1P78396 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCNA1P78396 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCNA1P78396 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.52■□□□□ 0.24
CCNA1P78396 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.52■□□□□ 0.24
CCNA1P78396 BCAS2P2-201ENST00000425064 674 ntBASIC16.52■□□□□ 0.24
CCNA1P78396 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCNA1P78396 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.52■□□□□ 0.24
CCNA1P78396 AC140113.1-201ENST00000603467 169 ntBASIC16.52■□□□□ 0.24
CCNA1P78396 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CCNA1P78396 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CCNA1P78396 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.52■□□□□ 0.23
CCNA1P78396 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.52■□□□□ 0.23
CCNA1P78396 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCNA1P78396 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCNA1P78396 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCNA1P78396 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.52■□□□□ 0.23
CCNA1P78396 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCNA1P78396 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCNA1P78396 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.52■□□□□ 0.23
CCNA1P78396 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCNA1P78396 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CCNA1P78396 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCNA1P78396 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCNA1P78396 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCNA1P78396 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.52■□□□□ 0.23
CCNA1P78396 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.52■□□□□ 0.23
CCNA1P78396 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CCNA1P78396 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CCNA1P78396 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCNA1P78396 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.52■□□□□ 0.23
CCNA1P78396 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCNA1P78396 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.51■□□□□ 0.23
CCNA1P78396 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.51■□□□□ 0.23
CCNA1P78396 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCNA1P78396 RN7SKP109-201ENST00000410592 316 ntBASIC16.51■□□□□ 0.23
CCNA1P78396 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.51■□□□□ 0.23
CCNA1P78396 KRT18P66-201ENST00000452970 1269 ntBASIC16.51■□□□□ 0.23
CCNA1P78396 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.51■□□□□ 0.23
CCNA1P78396 AC084752.1-201ENST00000509766 622 ntBASIC16.51■□□□□ 0.23
CCNA1P78396 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.51■□□□□ 0.23
CCNA1P78396 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.51■□□□□ 0.23
CCNA1P78396 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.51■□□□□ 0.23
CCNA1P78396 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.51■□□□□ 0.23
CCNA1P78396 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.51■□□□□ 0.23
CCNA1P78396 MIR4472-1-201ENST00000584349 80 ntBASIC16.51■□□□□ 0.23
CCNA1P78396 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCNA1P78396 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CCNA1P78396 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.51■□□□□ 0.23
CCNA1P78396 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.51■□□□□ 0.23
CCNA1P78396 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCNA1P78396 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.51■□□□□ 0.23
CCNA1P78396 AC063926.3-201ENST00000624734 5658 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms