Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
YBX1P67809 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.31□□□□□ -0.12
YBX1P67809 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
YBX1P67809 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.31□□□□□ -0.12
YBX1P67809 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.31□□□□□ -0.12
YBX1P67809 HOMER2P2-201ENST00000451621 847 ntBASIC14.31□□□□□ -0.12
YBX1P67809 RPL13AP20-201ENST00000459725 609 ntBASIC14.31□□□□□ -0.12
YBX1P67809 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.31□□□□□ -0.12
YBX1P67809 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
YBX1P67809 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.31□□□□□ -0.12
YBX1P67809 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 DUX4L45-201ENST00000566406 1057 ntBASIC14.31□□□□□ -0.12
YBX1P67809 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
YBX1P67809 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 AC090505.1-201ENST00000430515 1834 ntBASIC14.31□□□□□ -0.12
YBX1P67809 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.31□□□□□ -0.12
YBX1P67809 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 AL136172.1-201ENST00000598590 1394 ntBASIC14.31□□□□□ -0.12
YBX1P67809 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 AC099521.3-201ENST00000624251 2938 ntBASIC14.31□□□□□ -0.12
YBX1P67809 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
YBX1P67809 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
YBX1P67809 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.31□□□□□ -0.12
YBX1P67809 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 CICP8-201ENST00000455800 2813 ntBASIC14.3□□□□□ -0.12
YBX1P67809 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
YBX1P67809 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
YBX1P67809 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
YBX1P67809 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.3□□□□□ -0.12
YBX1P67809 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.3□□□□□ -0.12
YBX1P67809 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.3□□□□□ -0.12
YBX1P67809 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.3□□□□□ -0.12
YBX1P67809 YBX1P6-201ENST00000442962 1002 ntBASIC14.3□□□□□ -0.12
YBX1P67809 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.3□□□□□ -0.12
YBX1P67809 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 AC100850.1-201ENST00000506768 649 ntBASIC14.3□□□□□ -0.12
YBX1P67809 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.3□□□□□ -0.12
YBX1P67809 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.3□□□□□ -0.12
YBX1P67809 MIR4783-201ENST00000580343 82 ntBASIC14.3□□□□□ -0.12
YBX1P67809 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.3□□□□□ -0.12
YBX1P67809 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.3□□□□□ -0.12
YBX1P67809 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.3□□□□□ -0.12
YBX1P67809 AC010328.2-201ENST00000597698 1111 ntBASIC14.3□□□□□ -0.12
YBX1P67809 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.3□□□□□ -0.12
YBX1P67809 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.3□□□□□ -0.12
YBX1P67809 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.3□□□□□ -0.12
YBX1P67809 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 REXO1L6P-201ENST00000603433 1515 ntBASIC14.3□□□□□ -0.12
YBX1P67809 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.3□□□□□ -0.12
YBX1P67809 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 DGCR9-201ENST00000609630 2415 ntBASIC14.3□□□□□ -0.12
YBX1P67809 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YBX1P67809 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
YBX1P67809 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
YBX1P67809 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
YBX1P67809 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.29□□□□□ -0.12
YBX1P67809 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
YBX1P67809 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
YBX1P67809 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.29□□□□□ -0.12
YBX1P67809 RNA5SP412-201ENST00000516234 123 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms