Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC015688.4-201ENST00000580780 1647 ntBASIC12.84□□□□□ -0.35
CLDN12P56749 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CLDN12P56749 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CLDN12P56749 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN12P56749 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
CLDN12P56749 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.83□□□□□ -0.35
CLDN12P56749 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.83□□□□□ -0.35
CLDN12P56749 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CLDN12P56749 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN12P56749 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
CLDN12P56749 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CLDN12P56749 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 DNAJB3-201ENST00000446806 729 ntBASIC12.83□□□□□ -0.36
CLDN12P56749 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.83□□□□□ -0.36
CLDN12P56749 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN12P56749 AL512356.2-201ENST00000546955 174 ntBASIC12.83□□□□□ -0.36
CLDN12P56749 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 AL596442.2-201ENST00000610240 980 ntBASIC12.83□□□□□ -0.36
CLDN12P56749 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.83□□□□□ -0.36
CLDN12P56749 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 AC073592.8-201ENST00000624126 511 ntBASIC12.83□□□□□ -0.36
CLDN12P56749 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.83□□□□□ -0.36
CLDN12P56749 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CLDN12P56749 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CLDN12P56749 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CLDN12P56749 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN12P56749 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
CLDN12P56749 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN12P56749 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CLDN12P56749 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
CLDN12P56749 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN12P56749 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN12P56749 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CLDN12P56749 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CLDN12P56749 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN12P56749 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CLDN12P56749 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 AC114271.1-201ENST00000612689 2813 ntBASIC12.82□□□□□ -0.36
CLDN12P56749 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CLDN12P56749 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN12P56749 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 AL645937.2-201ENST00000396808 931 ntBASIC12.82□□□□□ -0.36
CLDN12P56749 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.82□□□□□ -0.36
CLDN12P56749 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.82□□□□□ -0.36
CLDN12P56749 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 AC026434.2-201ENST00000506094 1078 ntBASIC12.82□□□□□ -0.36
CLDN12P56749 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDN12P56749 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDN12P56749 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.82□□□□□ -0.36
CLDN12P56749 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.82□□□□□ -0.36
CLDN12P56749 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CLDN12P56749 AC092364.2-202ENST00000597012 1073 ntBASIC12.82□□□□□ -0.36
CLDN12P56749 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.82□□□□□ -0.36
CLDN12P56749 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.82□□□□□ -0.36
CLDN12P56749 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms