Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.84□□□□□ -0.35
FOXG1P55316 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
FOXG1P55316 RBM8B-201ENST00000555532 525 ntBASIC12.84□□□□□ -0.35
FOXG1P55316 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.84□□□□□ -0.35
FOXG1P55316 SNORD3B-2-202ENST00000571722 791 ntBASIC12.84□□□□□ -0.35
FOXG1P55316 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.84□□□□□ -0.35
FOXG1P55316 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FOXG1P55316 AC009884.2-201ENST00000603110 324 ntBASIC12.84□□□□□ -0.35
FOXG1P55316 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.84□□□□□ -0.35
FOXG1P55316 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.84□□□□□ -0.35
FOXG1P55316 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
FOXG1P55316 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.84□□□□□ -0.35
FOXG1P55316 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FOXG1P55316 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
FOXG1P55316 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
FOXG1P55316 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
FOXG1P55316 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
FOXG1P55316 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
FOXG1P55316 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
FOXG1P55316 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FOXG1P55316 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
FOXG1P55316 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.84□□□□□ -0.35
FOXG1P55316 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.84□□□□□ -0.35
FOXG1P55316 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FOXG1P55316 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.84□□□□□ -0.35
FOXG1P55316 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
FOXG1P55316 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FOXG1P55316 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FOXG1P55316 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
FOXG1P55316 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
FOXG1P55316 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
FOXG1P55316 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
FOXG1P55316 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
FOXG1P55316 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 FAM58BP-201ENST00000439056 645 ntBASIC12.83□□□□□ -0.36
FOXG1P55316 EIF4HP1-201ENST00000453115 687 ntBASIC12.83□□□□□ -0.36
FOXG1P55316 AC022494.1-201ENST00000466044 728 ntBASIC12.83□□□□□ -0.36
FOXG1P55316 AC091804.1-201ENST00000486888 567 ntBASIC12.83□□□□□ -0.36
FOXG1P55316 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.83□□□□□ -0.36
FOXG1P55316 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.83□□□□□ -0.36
FOXG1P55316 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.83□□□□□ -0.36
FOXG1P55316 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.83□□□□□ -0.36
FOXG1P55316 AC013355.1-201ENST00000562625 723 ntBASIC12.83□□□□□ -0.36
FOXG1P55316 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.83□□□□□ -0.36
FOXG1P55316 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.83□□□□□ -0.36
FOXG1P55316 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
FOXG1P55316 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
FOXG1P55316 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.83□□□□□ -0.36
FOXG1P55316 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
FOXG1P55316 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
FOXG1P55316 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.83□□□□□ -0.36
FOXG1P55316 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.83□□□□□ -0.36
FOXG1P55316 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
FOXG1P55316 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.83□□□□□ -0.36
FOXG1P55316 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FOXG1P55316 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.83□□□□□ -0.36
FOXG1P55316 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.83□□□□□ -0.36
FOXG1P55316 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.82□□□□□ -0.36
FOXG1P55316 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
FOXG1P55316 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
FOXG1P55316 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
FOXG1P55316 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.82□□□□□ -0.36
FOXG1P55316 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
FOXG1P55316 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.82□□□□□ -0.36
FOXG1P55316 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.82□□□□□ -0.36
FOXG1P55316 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.82□□□□□ -0.36
FOXG1P55316 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
FOXG1P55316 AKR7A2P1-201ENST00000460134 915 ntBASIC12.82□□□□□ -0.36
FOXG1P55316 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.82□□□□□ -0.36
FOXG1P55316 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.82□□□□□ -0.36
FOXG1P55316 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.82□□□□□ -0.36
FOXG1P55316 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.82□□□□□ -0.36
FOXG1P55316 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms