Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
USP11P51784 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.52■□□□□ 0.24
USP11P51784 KRT18P36-201ENST00000411618 1276 ntBASIC16.52■□□□□ 0.24
USP11P51784 AC016700.1-201ENST00000429424 312 ntBASIC16.52■□□□□ 0.24
USP11P51784 AC078875.1-201ENST00000431907 724 ntBASIC16.52■□□□□ 0.24
USP11P51784 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.52■□□□□ 0.24
USP11P51784 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.52■□□□□ 0.24
USP11P51784 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP11P51784 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.52■□□□□ 0.24
USP11P51784 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.52■□□□□ 0.24
USP11P51784 AC124068.2-201ENST00000569473 1109 ntBASIC16.52■□□□□ 0.24
USP11P51784 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP11P51784 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.52■□□□□ 0.24
USP11P51784 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.52■□□□□ 0.24
USP11P51784 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
USP11P51784 MIR3615-201ENST00000581999 87 ntBASIC16.52■□□□□ 0.24
USP11P51784 AC020914.3-201ENST00000594712 304 ntBASIC16.52■□□□□ 0.24
USP11P51784 AC138649.2-201ENST00000615886 705 ntBASIC16.52■□□□□ 0.24
USP11P51784 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP11P51784 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP11P51784 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP11P51784 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP11P51784 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP11P51784 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
USP11P51784 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.52■□□□□ 0.23
USP11P51784 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP11P51784 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP11P51784 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
USP11P51784 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP11P51784 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
USP11P51784 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.51■□□□□ 0.23
USP11P51784 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.51■□□□□ 0.23
USP11P51784 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.51■□□□□ 0.23
USP11P51784 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.51■□□□□ 0.23
USP11P51784 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.51■□□□□ 0.23
USP11P51784 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.51■□□□□ 0.23
USP11P51784 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.51■□□□□ 0.23
USP11P51784 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.51■□□□□ 0.23
USP11P51784 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.51■□□□□ 0.23
USP11P51784 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.51■□□□□ 0.23
USP11P51784 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
USP11P51784 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.51■□□□□ 0.23
USP11P51784 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.51■□□□□ 0.23
USP11P51784 AC244093.1-201ENST00000610837 814 ntBASIC16.51■□□□□ 0.23
USP11P51784 MIR6787-201ENST00000616675 61 ntBASIC16.51■□□□□ 0.23
USP11P51784 GPR182-203ENST00000622922 591 ntBASIC16.51■□□□□ 0.23
USP11P51784 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.51■□□□□ 0.23
USP11P51784 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.51■□□□□ 0.23
USP11P51784 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.51■□□□□ 0.23
USP11P51784 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
USP11P51784 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.51■□□□□ 0.23
USP11P51784 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
USP11P51784 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
USP11P51784 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP11P51784 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
USP11P51784 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.51■□□□□ 0.23
USP11P51784 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
USP11P51784 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP11P51784 TUBBP5-203ENST00000508529 1334 ntBASIC16.5■□□□□ 0.23
USP11P51784 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
USP11P51784 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.5■□□□□ 0.23
USP11P51784 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP11P51784 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.5■□□□□ 0.23
USP11P51784 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.5■□□□□ 0.23
USP11P51784 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP11P51784 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.5■□□□□ 0.23
USP11P51784 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.5■□□□□ 0.23
USP11P51784 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.5■□□□□ 0.23
USP11P51784 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP11P51784 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP11P51784 AL008707.1-201ENST00000422498 534 ntBASIC16.5■□□□□ 0.23
USP11P51784 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.5■□□□□ 0.23
USP11P51784 EIF4HP1-201ENST00000453115 687 ntBASIC16.5■□□□□ 0.23
USP11P51784 AC125604.1-201ENST00000496255 707 ntBASIC16.5■□□□□ 0.23
USP11P51784 SCARNA20.5-201ENST00000516991 142 ntBASIC16.5■□□□□ 0.23
USP11P51784 AC022217.1-201ENST00000521069 738 ntBASIC16.5■□□□□ 0.23
USP11P51784 PGAM1P5-201ENST00000548011 764 ntBASIC16.5■□□□□ 0.23
USP11P51784 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.5■□□□□ 0.23
USP11P51784 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.5■□□□□ 0.23
USP11P51784 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.5■□□□□ 0.23
USP11P51784 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.5■□□□□ 0.23
USP11P51784 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP11P51784 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP11P51784 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP11P51784 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
USP11P51784 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms