Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 AC092933.1-201ENST00000393644 945 ntBASIC13.57□□□□□ -0.24
SLC1A3P43003 BCRP2-202ENST00000447763 634 ntBASIC13.57□□□□□ -0.24
SLC1A3P43003 KRT17P7-201ENST00000451704 1104 ntBASIC13.57□□□□□ -0.24
SLC1A3P43003 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.57□□□□□ -0.24
SLC1A3P43003 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.57□□□□□ -0.24
SLC1A3P43003 BCRP6-201ENST00000510112 632 ntBASIC13.57□□□□□ -0.24
SLC1A3P43003 BCRP7-201ENST00000511549 544 ntBASIC13.57□□□□□ -0.24
SLC1A3P43003 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A3P43003 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A3P43003 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.57□□□□□ -0.24
SLC1A3P43003 AC132938.2-201ENST00000579188 680 ntBASIC13.57□□□□□ -0.24
SLC1A3P43003 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.57□□□□□ -0.24
SLC1A3P43003 BTNL10-201ENST00000595971 695 ntBASIC13.57□□□□□ -0.24
SLC1A3P43003 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SLC1A3P43003 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.57□□□□□ -0.24
SLC1A3P43003 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.57□□□□□ -0.24
SLC1A3P43003 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.57□□□□□ -0.24
SLC1A3P43003 AL591163.1-201ENST00000641757 987 ntBASIC13.57□□□□□ -0.24
SLC1A3P43003 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A3P43003 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A3P43003 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A3P43003 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A3P43003 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.57□□□□□ -0.24
SLC1A3P43003 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A3P43003 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A3P43003 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A3P43003 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A3P43003 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A3P43003 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A3P43003 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A3P43003 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A3P43003 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.57□□□□□ -0.24
SLC1A3P43003 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SLC1A3P43003 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A3P43003 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A3P43003 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A3P43003 AL136172.1-201ENST00000598590 1394 ntBASIC13.57□□□□□ -0.24
SLC1A3P43003 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A3P43003 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A3P43003 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A3P43003 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A3P43003 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SLC1A3P43003 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.56□□□□□ -0.24
SLC1A3P43003 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A3P43003 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SLC1A3P43003 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.56□□□□□ -0.24
SLC1A3P43003 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 CICP17-201ENST00000418553 2377 ntBASIC13.56□□□□□ -0.24
SLC1A3P43003 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.56□□□□□ -0.24
SLC1A3P43003 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SLC1A3P43003 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A3P43003 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 NME2P1-201ENST00000426182 414 ntBASIC13.56□□□□□ -0.24
SLC1A3P43003 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.56□□□□□ -0.24
SLC1A3P43003 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A3P43003 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 RNA5SP486-201ENST00000515961 83 ntBASIC13.56□□□□□ -0.24
SLC1A3P43003 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.56□□□□□ -0.24
SLC1A3P43003 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.56□□□□□ -0.24
SLC1A3P43003 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.56□□□□□ -0.24
SLC1A3P43003 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.56□□□□□ -0.24
SLC1A3P43003 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A3P43003 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A3P43003 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 FKBP4P6-201ENST00000457486 1332 ntBASIC13.56□□□□□ -0.24
SLC1A3P43003 MRPL37P1-201ENST00000592451 1337 ntBASIC13.56□□□□□ -0.24
SLC1A3P43003 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SLC1A3P43003 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
SLC1A3P43003 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SLC1A3P43003 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SLC1A3P43003 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SLC1A3P43003 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A3P43003 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A3P43003 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.55□□□□□ -0.24
SLC1A3P43003 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms