Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
USP8P40818 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.12■□□□□ 0.17
USP8P40818 FO681548.1-201ENST00000455617 1132 ntBASIC16.12■□□□□ 0.17
USP8P40818 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
USP8P40818 RN7SL752P-201ENST00000463779 287 ntBASIC16.12■□□□□ 0.17
USP8P40818 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
USP8P40818 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.12■□□□□ 0.17
USP8P40818 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.12■□□□□ 0.17
USP8P40818 AC027307.3-201ENST00000594262 1100 ntBASIC16.12■□□□□ 0.17
USP8P40818 AC010319.3-201ENST00000597028 470 ntBASIC16.12■□□□□ 0.17
USP8P40818 AC004466.1-201ENST00000599515 1080 ntBASIC16.12■□□□□ 0.17
USP8P40818 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.12■□□□□ 0.17
USP8P40818 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
USP8P40818 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
USP8P40818 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
USP8P40818 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
USP8P40818 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
USP8P40818 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.12■□□□□ 0.17
USP8P40818 AC134312.5-201ENST00000568031 1313 ntBASIC16.12■□□□□ 0.17
USP8P40818 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
USP8P40818 COL6A4P2-202ENST00000504443 2753 ntBASIC16.12■□□□□ 0.17
USP8P40818 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
USP8P40818 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.12■□□□□ 0.17
USP8P40818 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
USP8P40818 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
USP8P40818 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.11■□□□□ 0.17
USP8P40818 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
USP8P40818 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.11■□□□□ 0.17
USP8P40818 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
USP8P40818 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
USP8P40818 SALL4P5-201ENST00000419001 1760 ntBASIC16.11■□□□□ 0.17
USP8P40818 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.11■□□□□ 0.17
USP8P40818 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
USP8P40818 BAATP1-201ENST00000412284 1225 ntBASIC16.11■□□□□ 0.17
USP8P40818 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
USP8P40818 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 AC022137.2-201ENST00000503482 481 ntBASIC16.11■□□□□ 0.17
USP8P40818 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.11■□□□□ 0.17
USP8P40818 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.11■□□□□ 0.17
USP8P40818 PTP4A1P2-201ENST00000546033 454 ntBASIC16.11■□□□□ 0.17
USP8P40818 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.11■□□□□ 0.17
USP8P40818 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.11■□□□□ 0.17
USP8P40818 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.11■□□□□ 0.17
USP8P40818 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
USP8P40818 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.11■□□□□ 0.17
USP8P40818 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
USP8P40818 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
USP8P40818 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.11■□□□□ 0.17
USP8P40818 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.11■□□□□ 0.17
USP8P40818 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.11■□□□□ 0.17
USP8P40818 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC16.11■□□□□ 0.17
USP8P40818 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
USP8P40818 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
USP8P40818 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP8P40818 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.1■□□□□ 0.17
USP8P40818 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.1■□□□□ 0.17
USP8P40818 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
USP8P40818 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.1■□□□□ 0.17
USP8P40818 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.1■□□□□ 0.17
USP8P40818 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.1■□□□□ 0.17
USP8P40818 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.1■□□□□ 0.17
USP8P40818 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.1■□□□□ 0.17
USP8P40818 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
USP8P40818 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.1■□□□□ 0.17
USP8P40818 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
USP8P40818 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
USP8P40818 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.1■□□□□ 0.17
USP8P40818 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP8P40818 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms