Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RPA3P35244 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.9□□□□□ -0.02
RPA3P35244 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.9□□□□□ -0.02
RPA3P35244 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RPA3P35244 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RPA3P35244 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.9□□□□□ -0.02
RPA3P35244 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.9□□□□□ -0.02
RPA3P35244 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RPA3P35244 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RPA3P35244 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RPA3P35244 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
RPA3P35244 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RPA3P35244 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 AP006294.1-201ENST00000415407 339 ntBASIC14.9□□□□□ -0.02
RPA3P35244 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.9□□□□□ -0.02
RPA3P35244 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.9□□□□□ -0.02
RPA3P35244 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.9□□□□□ -0.02
RPA3P35244 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.9□□□□□ -0.02
RPA3P35244 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.9□□□□□ -0.02
RPA3P35244 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RPA3P35244 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.9□□□□□ -0.02
RPA3P35244 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RPA3P35244 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.9□□□□□ -0.02
RPA3P35244 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.9□□□□□ -0.02
RPA3P35244 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RPA3P35244 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RPA3P35244 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RPA3P35244 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RPA3P35244 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.9□□□□□ -0.02
RPA3P35244 AC073548.1-201ENST00000624088 1882 ntBASIC14.9□□□□□ -0.02
RPA3P35244 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RPA3P35244 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 AC011498.7-201ENST00000624986 2027 ntBASIC14.9□□□□□ -0.02
RPA3P35244 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 AL138799.1-201ENST00000448213 1675 ntBASIC14.9□□□□□ -0.02
RPA3P35244 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RPA3P35244 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.89□□□□□ -0.03
RPA3P35244 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
RPA3P35244 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.89□□□□□ -0.03
RPA3P35244 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 AC011840.2-201ENST00000563063 1520 ntBASIC14.89□□□□□ -0.03
RPA3P35244 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.89□□□□□ -0.03
RPA3P35244 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.89□□□□□ -0.03
RPA3P35244 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.89□□□□□ -0.03
RPA3P35244 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.89□□□□□ -0.03
RPA3P35244 WFDC1-204ENST00000613603 549 ntBASIC14.89□□□□□ -0.03
RPA3P35244 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RPA3P35244 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 AC025048.6-201ENST00000634326 1161 ntBASIC14.89□□□□□ -0.03
RPA3P35244 AL358472.5-202ENST00000641448 1267 ntBASIC14.89□□□□□ -0.03
RPA3P35244 AC020658.7-201ENST00000624274 2442 ntBASIC14.89□□□□□ -0.03
RPA3P35244 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
RPA3P35244 HSPA8P5-201ENST00000456928 2069 ntBASIC14.89□□□□□ -0.03
RPA3P35244 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 NUTM2HP-201ENST00000442076 2498 ntBASIC14.89□□□□□ -0.03
RPA3P35244 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RPA3P35244 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPA3P35244 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms