Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VCLP18206 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.87□□□□□ -0.03
VCLP18206 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
VCLP18206 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 EIF3FP3-201ENST00000434851 1086 ntBASIC14.87□□□□□ -0.03
VCLP18206 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.87□□□□□ -0.03
VCLP18206 DUX4L47-201ENST00000566374 394 ntBASIC14.87□□□□□ -0.03
VCLP18206 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.87□□□□□ -0.03
VCLP18206 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.87□□□□□ -0.03
VCLP18206 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.87□□□□□ -0.03
VCLP18206 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.87□□□□□ -0.03
VCLP18206 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.87□□□□□ -0.03
VCLP18206 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCLP18206 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.87□□□□□ -0.03
VCLP18206 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.87□□□□□ -0.03
VCLP18206 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
VCLP18206 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.86□□□□□ -0.03
VCLP18206 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.86□□□□□ -0.03
VCLP18206 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VCLP18206 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.86□□□□□ -0.03
VCLP18206 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.86□□□□□ -0.03
VCLP18206 FAM197Y7-201ENST00000432892 766 ntBASIC14.86□□□□□ -0.03
VCLP18206 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.86□□□□□ -0.03
VCLP18206 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.86□□□□□ -0.03
VCLP18206 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.86□□□□□ -0.03
VCLP18206 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.86□□□□□ -0.03
VCLP18206 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.86□□□□□ -0.03
VCLP18206 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.86□□□□□ -0.03
VCLP18206 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 AL137783.1-201ENST00000623494 1896 ntBASIC14.86□□□□□ -0.03
VCLP18206 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 AC018442.1-201ENST00000421439 2061 ntBASIC14.86□□□□□ -0.03
VCLP18206 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.86□□□□□ -0.03
VCLP18206 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.86□□□□□ -0.03
VCLP18206 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.86□□□□□ -0.03
VCLP18206 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VCLP18206 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
VCLP18206 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
VCLP18206 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 AC018529.2-202ENST00000611482 3087 ntBASIC14.85□□□□□ -0.03
VCLP18206 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VCLP18206 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms