Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCNAP12004 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.4□□□□□ -0.1
PCNAP12004 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.4□□□□□ -0.1
PCNAP12004 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 AL355864.2-201ENST00000447420 863 ntBASIC14.4□□□□□ -0.1
PCNAP12004 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.4□□□□□ -0.1
PCNAP12004 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.4□□□□□ -0.1
PCNAP12004 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.4□□□□□ -0.1
PCNAP12004 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 AC022447.6-201ENST00000515522 438 ntBASIC14.4□□□□□ -0.1
PCNAP12004 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PCNAP12004 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.4□□□□□ -0.1
PCNAP12004 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.4□□□□□ -0.1
PCNAP12004 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 RPSAP52-203ENST00000622976 1023 ntBASIC14.4□□□□□ -0.1
PCNAP12004 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 BEND3P1-201ENST00000421591 1944 ntBASIC14.4□□□□□ -0.1
PCNAP12004 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.4□□□□□ -0.1
PCNAP12004 PEG13-201ENST00000631594 5667 ntBASIC14.4□□□□□ -0.1
PCNAP12004 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.4□□□□□ -0.1
PCNAP12004 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PCNAP12004 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 AC131212.3-201ENST00000624087 4219 ntBASIC14.4□□□□□ -0.1
PCNAP12004 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.4□□□□□ -0.1
PCNAP12004 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 AL354702.1-201ENST00000442006 1960 ntBASIC14.4□□□□□ -0.1
PCNAP12004 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCNAP12004 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCNAP12004 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCNAP12004 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCNAP12004 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 AC152010.1-201ENST00000415779 2006 ntBASIC14.39□□□□□ -0.11
PCNAP12004 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.39□□□□□ -0.11
PCNAP12004 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PCNAP12004 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.39□□□□□ -0.11
PCNAP12004 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.39□□□□□ -0.11
PCNAP12004 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
PCNAP12004 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.39□□□□□ -0.11
PCNAP12004 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.39□□□□□ -0.11
PCNAP12004 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.39□□□□□ -0.11
PCNAP12004 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.39□□□□□ -0.11
PCNAP12004 AC106760.1-201ENST00000508690 800 ntBASIC14.39□□□□□ -0.11
PCNAP12004 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCNAP12004 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
PCNAP12004 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
PCNAP12004 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.39□□□□□ -0.11
PCNAP12004 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.39□□□□□ -0.11
PCNAP12004 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PCNAP12004 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.39□□□□□ -0.11
PCNAP12004 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCNAP12004 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms