Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.52□□□□□ -0.57
CD28P10747 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CD28P10747 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.52□□□□□ -0.57
CD28P10747 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.52□□□□□ -0.57
CD28P10747 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.52□□□□□ -0.57
CD28P10747 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CD28P10747 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CD28P10747 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.51□□□□□ -0.57
CD28P10747 PEG13-201ENST00000631594 5667 ntBASIC11.51□□□□□ -0.57
CD28P10747 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.51□□□□□ -0.57
CD28P10747 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.51□□□□□ -0.57
CD28P10747 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.51□□□□□ -0.57
CD28P10747 MROH4P-201ENST00000431302 1578 ntBASIC11.51□□□□□ -0.57
CD28P10747 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
CD28P10747 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11.51□□□□□ -0.57
CD28P10747 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC11.51□□□□□ -0.57
CD28P10747 AC007274.2-201ENST00000421675 662 ntBASIC11.51□□□□□ -0.57
CD28P10747 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 VDAC1P1-201ENST00000439229 848 ntBASIC11.51□□□□□ -0.57
CD28P10747 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC11.51□□□□□ -0.57
CD28P10747 CICP12-201ENST00000455801 843 ntBASIC11.51□□□□□ -0.57
CD28P10747 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC11.51□□□□□ -0.57
CD28P10747 HLA-J-204ENST00000495278 958 ntBASIC11.51□□□□□ -0.57
CD28P10747 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.51□□□□□ -0.57
CD28P10747 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC11.51□□□□□ -0.57
CD28P10747 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC11.51□□□□□ -0.57
CD28P10747 AL133499.1-201ENST00000596207 608 ntBASIC11.51□□□□□ -0.57
CD28P10747 AL132994.2-201ENST00000603120 687 ntBASIC11.51□□□□□ -0.57
CD28P10747 MIR6720-201ENST00000611664 98 ntBASIC11.51□□□□□ -0.57
CD28P10747 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC11.51□□□□□ -0.57
CD28P10747 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC11.51□□□□□ -0.57
CD28P10747 AC027601.3-201ENST00000622907 509 ntBASIC11.51□□□□□ -0.57
CD28P10747 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.51□□□□□ -0.57
CD28P10747 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.51□□□□□ -0.57
CD28P10747 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CD28P10747 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.51□□□□□ -0.57
CD28P10747 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
CD28P10747 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
CD28P10747 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CD28P10747 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
CD28P10747 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CD28P10747 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CD28P10747 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.5□□□□□ -0.57
CD28P10747 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.5□□□□□ -0.57
CD28P10747 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.5□□□□□ -0.57
CD28P10747 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
CD28P10747 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.5□□□□□ -0.57
CD28P10747 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 AC023157.3-201ENST00000619086 2088 ntBASIC11.5□□□□□ -0.57
CD28P10747 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD28P10747 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms