Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC023141.7-201ENST00000430646 407 ntBASIC18.74■□□□□ 0.59
COL5A2P05997 IFNWP2-201ENST00000431203 580 ntBASIC18.74■□□□□ 0.59
COL5A2P05997 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC18.74■□□□□ 0.59
COL5A2P05997 RNLS-203ENST00000437752 525 ntTSL 2 BASIC18.74■□□□□ 0.59
COL5A2P05997 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
COL5A2P05997 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC18.74■□□□□ 0.59
COL5A2P05997 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC18.74■□□□□ 0.59
COL5A2P05997 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC18.74■□□□□ 0.59
COL5A2P05997 EMC4-208ENST00000559078 599 ntTSL 3 BASIC18.74■□□□□ 0.59
COL5A2P05997 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.74■□□□□ 0.59
COL5A2P05997 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC18.74■□□□□ 0.59
COL5A2P05997 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC18.74■□□□□ 0.59
COL5A2P05997 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC18.74■□□□□ 0.59
COL5A2P05997 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC18.74■□□□□ 0.59
COL5A2P05997 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC18.74■□□□□ 0.59
COL5A2P05997 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC18.74■□□□□ 0.59
COL5A2P05997 SHMT1P1-201ENST00000419974 1312 ntBASIC18.74■□□□□ 0.59
COL5A2P05997 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC18.74■□□□□ 0.59
COL5A2P05997 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC18.74■□□□□ 0.59
COL5A2P05997 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL5A2P05997 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL5A2P05997 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL5A2P05997 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.74■□□□□ 0.59
COL5A2P05997 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL5A2P05997 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC18.74■□□□□ 0.59
COL5A2P05997 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL5A2P05997 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL5A2P05997 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
COL5A2P05997 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.73■□□□□ 0.59
COL5A2P05997 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.73■□□□□ 0.59
COL5A2P05997 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.73■□□□□ 0.59
COL5A2P05997 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC18.73■□□□□ 0.59
COL5A2P05997 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC18.73■□□□□ 0.59
COL5A2P05997 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL5A2P05997 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
COL5A2P05997 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL5A2P05997 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
COL5A2P05997 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC18.73■□□□□ 0.59
COL5A2P05997 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
COL5A2P05997 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC18.73■□□□□ 0.59
COL5A2P05997 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC18.73■□□□□ 0.59
COL5A2P05997 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC18.73■□□□□ 0.59
COL5A2P05997 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC18.73■□□□□ 0.59
COL5A2P05997 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC18.73■□□□□ 0.59
COL5A2P05997 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC18.73■□□□□ 0.59
COL5A2P05997 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC18.73■□□□□ 0.59
COL5A2P05997 AC011462.4-201ENST00000616866 449 ntBASIC18.73■□□□□ 0.59
COL5A2P05997 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC18.73■□□□□ 0.59
COL5A2P05997 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
COL5A2P05997 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.73■□□□□ 0.59
COL5A2P05997 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
COL5A2P05997 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.73■□□□□ 0.59
COL5A2P05997 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC18.73■□□□□ 0.59
COL5A2P05997 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL5A2P05997 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL5A2P05997 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL5A2P05997 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COL5A2P05997 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
COL5A2P05997 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.72■□□□□ 0.59
COL5A2P05997 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL5A2P05997 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL5A2P05997 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.72■□□□□ 0.59
COL5A2P05997 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL5A2P05997 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL5A2P05997 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
COL5A2P05997 OR2W2P-201ENST00000406313 909 ntBASIC18.72■□□□□ 0.59
COL5A2P05997 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC18.72■□□□□ 0.59
COL5A2P05997 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL5A2P05997 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC18.72■□□□□ 0.59
COL5A2P05997 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC18.72■□□□□ 0.59
COL5A2P05997 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC18.72■□□□□ 0.59
COL5A2P05997 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.72■□□□□ 0.59
COL5A2P05997 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC18.72■□□□□ 0.59
COL5A2P05997 AC005777.1-201ENST00000588332 187 ntBASIC18.72■□□□□ 0.59
COL5A2P05997 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC18.72■□□□□ 0.59
COL5A2P05997 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC18.72■□□□□ 0.59
COL5A2P05997 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COL5A2P05997 AC139713.2-207ENST00000641556 1292 ntBASIC18.72■□□□□ 0.59
COL5A2P05997 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL5A2P05997 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms