Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 AC006001.1-201ENST00000325130 474 ntBASIC11.87□□□□□ -0.51
HLA-DRB1P01911 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 AL590640.2-201ENST00000457038 527 ntBASIC11.87□□□□□ -0.51
HLA-DRB1P01911 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 AC078819.1-201ENST00000547454 765 ntBASIC11.87□□□□□ -0.51
HLA-DRB1P01911 AC012085.1-201ENST00000548270 765 ntBASIC11.87□□□□□ -0.51
HLA-DRB1P01911 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 AC018529.2-202ENST00000611482 3087 ntBASIC11.87□□□□□ -0.51
HLA-DRB1P01911 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB1P01911 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 FKBP4P6-201ENST00000457486 1332 ntBASIC11.86□□□□□ -0.51
HLA-DRB1P01911 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 AL354989.2-201ENST00000435838 1540 ntBASIC11.86□□□□□ -0.51
HLA-DRB1P01911 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 CICP20-201ENST00000443330 2801 ntBASIC11.86□□□□□ -0.51
HLA-DRB1P01911 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 AC107918.4-201ENST00000641966 3141 ntBASIC11.86□□□□□ -0.51
HLA-DRB1P01911 RN7SKP230-201ENST00000365642 335 ntBASIC11.86□□□□□ -0.51
HLA-DRB1P01911 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 AC079776.1-201ENST00000401540 1152 ntBASIC11.86□□□□□ -0.51
HLA-DRB1P01911 AC112492.5-201ENST00000421897 457 ntBASIC11.86□□□□□ -0.51
HLA-DRB1P01911 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 FAM8A4P-201ENST00000435433 1213 ntBASIC11.86□□□□□ -0.51
HLA-DRB1P01911 KLF2P4-201ENST00000451959 1225 ntBASIC11.86□□□□□ -0.51
HLA-DRB1P01911 CROCCP4-201ENST00000457096 498 ntBASIC11.86□□□□□ -0.51
HLA-DRB1P01911 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 AC131206.1-201ENST00000538078 1211 ntBASIC11.86□□□□□ -0.51
HLA-DRB1P01911 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 AC106820.3-201ENST00000561653 397 ntBASIC11.86□□□□□ -0.51
HLA-DRB1P01911 AL512343.1-201ENST00000605837 169 ntBASIC11.86□□□□□ -0.51
HLA-DRB1P01911 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HLA-DRB1P01911 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms