Protein–RNA interactions for Protein: P00533

EGFR, Epidermal growth factor receptor, humanhuman

Predictions only

Length 1,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EGFRP00533 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.1■□□□□ 0.33
EGFRP00533 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.1■□□□□ 0.33
EGFRP00533 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.1■□□□□ 0.33
EGFRP00533 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EGFRP00533 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EGFRP00533 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
EGFRP00533 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.1■□□□□ 0.33
EGFRP00533 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EGFRP00533 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC17.1■□□□□ 0.33
EGFRP00533 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EGFRP00533 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EGFRP00533 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.1■□□□□ 0.33
EGFRP00533 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EGFRP00533 FUCA1P1-201ENST00000374476 1351 ntBASIC17.1■□□□□ 0.33
EGFRP00533 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EGFRP00533 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.1■□□□□ 0.33
EGFRP00533 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EGFRP00533 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EGFRP00533 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EGFRP00533 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EGFRP00533 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.1■□□□□ 0.33
EGFRP00533 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.1■□□□□ 0.33
EGFRP00533 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EGFRP00533 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EGFRP00533 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EGFRP00533 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EGFRP00533 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
EGFRP00533 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.09■□□□□ 0.33
EGFRP00533 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EGFRP00533 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EGFRP00533 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
EGFRP00533 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
EGFRP00533 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
EGFRP00533 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
EGFRP00533 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
EGFRP00533 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EGFRP00533 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC17.09■□□□□ 0.33
EGFRP00533 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC17.09■□□□□ 0.33
EGFRP00533 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EGFRP00533 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.09■□□□□ 0.33
EGFRP00533 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EGFRP00533 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.09■□□□□ 0.33
EGFRP00533 AC140658.4-201ENST00000561990 352 ntBASIC17.09■□□□□ 0.33
EGFRP00533 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.09■□□□□ 0.33
EGFRP00533 AC021016.3-201ENST00000608367 477 ntBASIC17.09■□□□□ 0.33
EGFRP00533 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EGFRP00533 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EGFRP00533 LAP3P2-201ENST00000454686 1454 ntBASIC17.09■□□□□ 0.33
EGFRP00533 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EGFRP00533 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.09■□□□□ 0.33
EGFRP00533 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
EGFRP00533 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EGFRP00533 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
EGFRP00533 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
EGFRP00533 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EGFRP00533 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EGFRP00533 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EGFRP00533 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EGFRP00533 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
EGFRP00533 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EGFRP00533 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EGFRP00533 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EGFRP00533 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
EGFRP00533 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
EGFRP00533 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
EGFRP00533 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EGFRP00533 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.08■□□□□ 0.33
EGFRP00533 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.08■□□□□ 0.33
EGFRP00533 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
EGFRP00533 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.08■□□□□ 0.33
EGFRP00533 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.08■□□□□ 0.33
EGFRP00533 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EGFRP00533 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EGFRP00533 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.08■□□□□ 0.33
EGFRP00533 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
EGFRP00533 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
EGFRP00533 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EGFRP00533 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
EGFRP00533 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC17.08■□□□□ 0.32
EGFRP00533 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
EGFRP00533 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EGFRP00533 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
EGFRP00533 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
EGFRP00533 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.08■□□□□ 0.32
EGFRP00533 RN7SL375P-201ENST00000492442 298 ntBASIC17.08■□□□□ 0.32
EGFRP00533 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
EGFRP00533 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.08■□□□□ 0.32
EGFRP00533 MT2A-202ENST00000561491 581 ntTSL 2 BASIC17.08■□□□□ 0.32
EGFRP00533 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC17.08■□□□□ 0.32
EGFRP00533 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EGFRP00533 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.08■□□□□ 0.32
EGFRP00533 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC17.08■□□□□ 0.32
EGFRP00533 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.08■□□□□ 0.32
EGFRP00533 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
EGFRP00533 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EGFRP00533 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EGFRP00533 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
EGFRP00533 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EGFRP00533 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EGFRP00533 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms