Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.81■□□□□ 0.12
CSPG5O95196 MEG3_2.1-201ENST00000611456 105 ntBASIC15.81■□□□□ 0.12
CSPG5O95196 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.81■□□□□ 0.12
CSPG5O95196 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSPG5O95196 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.81■□□□□ 0.12
CSPG5O95196 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSPG5O95196 AC051619.9-201ENST00000623237 597 ntBASIC15.81■□□□□ 0.12
CSPG5O95196 Z98259.2-201ENST00000641583 609 ntBASIC15.81■□□□□ 0.12
CSPG5O95196 AL645728.2-202ENST00000641679 227 ntBASIC15.81■□□□□ 0.12
CSPG5O95196 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSPG5O95196 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
CSPG5O95196 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSPG5O95196 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.81■□□□□ 0.12
CSPG5O95196 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSPG5O95196 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSPG5O95196 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSPG5O95196 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSPG5O95196 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSPG5O95196 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSPG5O95196 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CSPG5O95196 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.8■□□□□ 0.12
CSPG5O95196 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.8■□□□□ 0.12
CSPG5O95196 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.8■□□□□ 0.12
CSPG5O95196 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CSPG5O95196 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.8■□□□□ 0.12
CSPG5O95196 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CSPG5O95196 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 FRMPD2B-201ENST00000431305 1347 ntBASIC15.8■□□□□ 0.12
CSPG5O95196 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CSPG5O95196 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 Z69890.1-201ENST00000382990 339 ntBASIC15.8■□□□□ 0.12
CSPG5O95196 AL583805.1-201ENST00000391389 531 ntBASIC15.8■□□□□ 0.12
CSPG5O95196 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.8■□□□□ 0.12
CSPG5O95196 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.8■□□□□ 0.12
CSPG5O95196 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.8■□□□□ 0.12
CSPG5O95196 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.8■□□□□ 0.12
CSPG5O95196 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.8■□□□□ 0.12
CSPG5O95196 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CSPG5O95196 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.8■□□□□ 0.12
CSPG5O95196 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.8■□□□□ 0.12
CSPG5O95196 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.8■□□□□ 0.12
CSPG5O95196 AC009884.2-201ENST00000603110 324 ntBASIC15.8■□□□□ 0.12
CSPG5O95196 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.8■□□□□ 0.12
CSPG5O95196 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.8■□□□□ 0.12
CSPG5O95196 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.8■□□□□ 0.12
CSPG5O95196 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.8■□□□□ 0.12
CSPG5O95196 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSPG5O95196 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.8■□□□□ 0.12
CSPG5O95196 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.8■□□□□ 0.12
CSPG5O95196 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.8■□□□□ 0.12
CSPG5O95196 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CSPG5O95196 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.8■□□□□ 0.12
CSPG5O95196 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.79■□□□□ 0.12
CSPG5O95196 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.79■□□□□ 0.12
CSPG5O95196 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG5O95196 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CSPG5O95196 PPT1-215ENST00000641471 2368 ntBASIC15.79■□□□□ 0.12
CSPG5O95196 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.79■□□□□ 0.12
CSPG5O95196 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG5O95196 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CSPG5O95196 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CSPG5O95196 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CSPG5O95196 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG5O95196 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CSPG5O95196 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.79■□□□□ 0.12
CSPG5O95196 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG5O95196 AC105250.1-201ENST00000509378 2057 ntBASIC15.79■□□□□ 0.12
CSPG5O95196 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG5O95196 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG5O95196 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.79■□□□□ 0.12
CSPG5O95196 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.79■□□□□ 0.12
CSPG5O95196 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG5O95196 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CSPG5O95196 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.79■□□□□ 0.12
CSPG5O95196 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG5O95196 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CSPG5O95196 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG5O95196 RPL5P21-201ENST00000404620 815 ntBASIC15.79■□□□□ 0.12
CSPG5O95196 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG5O95196 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.79■□□□□ 0.12
CSPG5O95196 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.79■□□□□ 0.12
CSPG5O95196 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.79■□□□□ 0.12
CSPG5O95196 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.79■□□□□ 0.12
CSPG5O95196 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.79■□□□□ 0.12
CSPG5O95196 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.79■□□□□ 0.12
CSPG5O95196 AC026803.1-201ENST00000569130 274 ntBASIC15.79■□□□□ 0.12
CSPG5O95196 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG5O95196 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 562.9 ms