Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC28A1O00337 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC28A1O00337 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
SLC28A1O00337 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC28A1O00337 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC28A1O00337 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC28A1O00337 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
SLC28A1O00337 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC28A1O00337 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC28A1O00337 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC28A1O00337 AL590440.2-201ENST00000641973 1595 ntBASIC14.17□□□□□ -0.14
SLC28A1O00337 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SLC28A1O00337 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC28A1O00337 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC28A1O00337 AP000593.2-201ENST00000542775 1433 ntBASIC14.17□□□□□ -0.14
SLC28A1O00337 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC28A1O00337 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SLC28A1O00337 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC28A1O00337 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SLC28A1O00337 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC28A1O00337 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC28A1O00337 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SLC28A1O00337 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.17□□□□□ -0.14
SLC28A1O00337 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.17□□□□□ -0.14
SLC28A1O00337 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC28A1O00337 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC28A1O00337 WASH4P-201ENST00000564273 1246 ntBASIC14.17□□□□□ -0.14
SLC28A1O00337 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC28A1O00337 RN7SL204P-201ENST00000582831 262 ntBASIC14.17□□□□□ -0.14
SLC28A1O00337 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC28A1O00337 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC28A1O00337 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SLC28A1O00337 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC28A1O00337 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 CICP16-201ENST00000502609 2813 ntBASIC14.17□□□□□ -0.14
SLC28A1O00337 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
SLC28A1O00337 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SLC28A1O00337 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC28A1O00337 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
SLC28A1O00337 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SLC28A1O00337 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SLC28A1O00337 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SLC28A1O00337 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SLC28A1O00337 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SLC28A1O00337 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC28A1O00337 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC28A1O00337 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SLC28A1O00337 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC28A1O00337 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
SLC28A1O00337 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 TPM3P8-201ENST00000330554 643 ntBASIC14.16□□□□□ -0.14
SLC28A1O00337 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SLC28A1O00337 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC28A1O00337 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC28A1O00337 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC28A1O00337 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC28A1O00337 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC28A1O00337 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC28A1O00337 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.16□□□□□ -0.14
SLC28A1O00337 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC28A1O00337 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC28A1O00337 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SLC28A1O00337 AL031595.1-201ENST00000623969 4709 ntBASIC14.16□□□□□ -0.14
SLC28A1O00337 AL138709.1-201ENST00000614840 1693 ntBASIC14.16□□□□□ -0.14
SLC28A1O00337 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.16□□□□□ -0.14
SLC28A1O00337 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC28A1O00337 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC28A1O00337 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
SLC28A1O00337 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms