Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC188H7C350 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC188H7C350 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC188H7C350 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC188H7C350 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC188H7C350 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC188H7C350 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC188H7C350 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC188H7C350 C1QBPP1-201ENST00000400117 770 ntBASIC15.3■□□□□ 0.04
CCDC188H7C350 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC188H7C350 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC188H7C350 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC188H7C350 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC188H7C350 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC188H7C350 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CCDC188H7C350 TPRX2P-201ENST00000535362 881 ntBASIC15.3■□□□□ 0.04
CCDC188H7C350 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC188H7C350 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC188H7C350 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC188H7C350 AC004449.1-201ENST00000564240 433 ntBASIC15.3■□□□□ 0.04
CCDC188H7C350 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.3■□□□□ 0.04
CCDC188H7C350 AC008738.7-201ENST00000609744 511 ntBASIC15.3■□□□□ 0.04
CCDC188H7C350 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC188H7C350 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC188H7C350 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC188H7C350 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC188H7C350 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CCDC188H7C350 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC188H7C350 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC188H7C350 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC188H7C350 AL356585.2-201ENST00000625078 2396 ntBASIC15.29■□□□□ 0.04
CCDC188H7C350 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC188H7C350 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC188H7C350 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCDC188H7C350 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC188H7C350 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC188H7C350 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC188H7C350 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC188H7C350 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC188H7C350 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC188H7C350 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 AC064801.2-201ENST00000625052 1303 ntBASIC15.29■□□□□ 0.04
CCDC188H7C350 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC188H7C350 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC188H7C350 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC188H7C350 MEP1AP4-201ENST00000423244 1087 ntBASIC15.29■□□□□ 0.04
CCDC188H7C350 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC188H7C350 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC188H7C350 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC188H7C350 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC188H7C350 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC188H7C350 AC023310.3-201ENST00000557027 670 ntBASIC15.29■□□□□ 0.04
CCDC188H7C350 AC100756.1-201ENST00000562736 682 ntBASIC15.29■□□□□ 0.04
CCDC188H7C350 AC138749.3-201ENST00000567691 622 ntBASIC15.29■□□□□ 0.04
CCDC188H7C350 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 BX088702.1-201ENST00000610784 235 ntBASIC15.29■□□□□ 0.04
CCDC188H7C350 AC116165.1-201ENST00000611806 668 ntBASIC15.29■□□□□ 0.04
CCDC188H7C350 AP005019.2-201ENST00000615104 511 ntBASIC15.29■□□□□ 0.04
CCDC188H7C350 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC188H7C350 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCDC188H7C350 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CCDC188H7C350 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC188H7C350 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC188H7C350 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC188H7C350 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CCDC188H7C350 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CCDC188H7C350 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC188H7C350 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC188H7C350 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC188H7C350 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC188H7C350 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC188H7C350 AC004241.5-201ENST00000623870 2448 ntBASIC15.28■□□□□ 0.04
CCDC188H7C350 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC188H7C350 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC188H7C350 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC188H7C350 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms