Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 AP001059.3-201ENST00000619053 235 ntBASIC15.76■□□□□ 0.11
CTAGE9A4FU28 AC134684.3-201ENST00000641758 218 ntBASIC15.76■□□□□ 0.11
CTAGE9A4FU28 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 AL138799.1-201ENST00000448213 1675 ntBASIC15.76■□□□□ 0.11
CTAGE9A4FU28 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTAGE9A4FU28 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 DUX4L47-201ENST00000566374 394 ntBASIC15.75■□□□□ 0.11
CTAGE9A4FU28 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 OS9-218ENST00000551035 2246 ntTSL 2 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTAGE9A4FU28 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 AC004899.2-201ENST00000622993 3860 ntBASIC15.74■□□□□ 0.11
CTAGE9A4FU28 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 TLE1P1-201ENST00000422965 589 ntBASIC15.74■□□□□ 0.11
CTAGE9A4FU28 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 AC007969.1-201ENST00000433675 447 ntBASIC15.74■□□□□ 0.11
CTAGE9A4FU28 AP006288.1-201ENST00000446065 395 ntBASIC15.74■□□□□ 0.11
CTAGE9A4FU28 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 AC004967.1-201ENST00000453589 447 ntBASIC15.74■□□□□ 0.11
CTAGE9A4FU28 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 TIMM17BP1-201ENST00000545713 516 ntBASIC15.74■□□□□ 0.11
CTAGE9A4FU28 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.74■□□□□ 0.11
CTAGE9A4FU28 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms