Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 TLE1P1-201ENST00000422965 589 ntBASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 AL596325.1-201ENST00000563991 1082 ntBASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 RPSAP52-203ENST00000622976 1023 ntBASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 AC018529.2-202ENST00000611482 3087 ntBASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.16□□□□□ -0.62
HLA-DRB4X5D2U9 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 AL591122.2-201ENST00000624125 1853 ntBASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 AC005229.1-201ENST00000392885 409 ntBASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 AL512384.1-201ENST00000406683 331 ntBASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 AC245100.3-201ENST00000441281 285 ntBASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 TTTY23B-201ENST00000442790 549 ntBASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 INE1-201ENST00000456273 945 ntBASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 RN7SL48P-201ENST00000579283 293 ntBASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms