Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 AC011498.7-201ENST00000624986 2027 ntBASIC13.19□□□□□ -0.3
COPS3Q9UNS2 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 METTL21AP1-201ENST00000438852 635 ntBASIC13.19□□□□□ -0.3
COPS3Q9UNS2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 GNAQP1-201ENST00000444815 1067 ntBASIC13.19□□□□□ -0.3
COPS3Q9UNS2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 AC130686.1-201ENST00000622936 2466 ntBASIC13.19□□□□□ -0.3
COPS3Q9UNS2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COPS3Q9UNS2 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 C1QBPP1-201ENST00000400117 770 ntBASIC13.18□□□□□ -0.3
COPS3Q9UNS2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 KLF2P2-201ENST00000416807 1039 ntBASIC13.18□□□□□ -0.3
COPS3Q9UNS2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 AC134915.1-201ENST00000426461 574 ntBASIC13.18□□□□□ -0.3
COPS3Q9UNS2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 AC007969.1-201ENST00000433675 447 ntBASIC13.18□□□□□ -0.3
COPS3Q9UNS2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 AC124283.3-201ENST00000570869 594 ntBASIC13.18□□□□□ -0.3
COPS3Q9UNS2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 AC004466.1-201ENST00000599515 1080 ntBASIC13.18□□□□□ -0.3
COPS3Q9UNS2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS3Q9UNS2 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms