Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 MIR645-201ENST00000385283 94 ntBASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 AC103592.1-201ENST00000394513 664 ntBASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 AL512310.5-201ENST00000551999 515 ntBASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 AC073352.2-201ENST00000609385 439 ntBASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 AL805961.1-201ENST00000642026 753 ntBASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 AC073869.2-201ENST00000417338 1026 ntBASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 AL627422.1-201ENST00000434104 580 ntBASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 RN7SL181P-201ENST00000462921 277 ntBASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 ORAOV1P1-201ENST00000503108 395 ntBASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 RN7SL665P-201ENST00000578793 300 ntBASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 AC242376.2-201ENST00000619355 883 ntBASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SYNPO2Q9UMS6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.67■□□□□ 0.26
SYNPO2Q9UMS6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.67■□□□□ 0.26
SYNPO2Q9UMS6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPO2Q9UMS6 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPO2Q9UMS6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.67■□□□□ 0.26
SYNPO2Q9UMS6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
SYNPO2Q9UMS6 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.67■□□□□ 0.26
SYNPO2Q9UMS6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SYNPO2Q9UMS6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPO2Q9UMS6 AL390755.1-201ENST00000623716 2027 ntBASIC16.67■□□□□ 0.26
SYNPO2Q9UMS6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SYNPO2Q9UMS6 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPO2Q9UMS6 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SYNPO2Q9UMS6 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms