Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 AGGF1P1-201ENST00000509500 2073 ntBASIC17.83■□□□□ 0.44
HMG20BQ9P0W2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 AC008132.1-202ENST00000342005 1389 ntBASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 CHMP4BP1-201ENST00000556017 588 ntBASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 AC100757.4-201ENST00000626934 759 ntBASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 AC138627.1-207ENST00000641560 1006 ntBASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 AC015688.4-201ENST00000580780 1647 ntBASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 AC026748.1-201ENST00000624349 3251 ntBASIC17.82■□□□□ 0.44
HMG20BQ9P0W2 FLJ16779-201ENST00000612722 7638 ntBASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 MIR769-201ENST00000390225 118 ntBASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 AL008707.1-201ENST00000422498 534 ntBASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 AP001505.2-201ENST00000616815 443 ntBASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 AC091544.8-201ENST00000619490 361 ntBASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.81■□□□□ 0.44
HMG20BQ9P0W2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 AC068418.2-201ENST00000577309 3703 ntBASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 AC097359.2-201ENST00000604992 2389 ntBASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 RN7SKP214-201ENST00000364208 315 ntBASIC17.8■□□□□ 0.44
HMG20BQ9P0W2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms