Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 LINC00265-2P-201ENST00000413372 782 ntBASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 AQP7P5-201ENST00000428759 1049 ntBASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 AQP7P4-201ENST00000447083 1042 ntBASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 AQP7P2-201ENST00000453967 1041 ntBASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 MYADML-201ENST00000474610 2147 ntBASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 HINT1-205ENST00000508488 703 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 AC093826.1-201ENST00000508655 993 ntBASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 IGHV1-12-201ENST00000518307 205 ntBASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 AC104506.1-201ENST00000609247 429 ntBASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 AQP7P3-201ENST00000624547 1041 ntBASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH11XQ9BZA7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCDH11XQ9BZA7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCDH11XQ9BZA7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 BX679664.3-201ENST00000414070 555 ntBASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 AC113935.1-201ENST00000471722 555 ntBASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 KLF17P1-201ENST00000547105 1126 ntBASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 AL118522.1-201ENST00000611368 560 ntBASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 AC064801.2-201ENST00000625052 1303 ntBASIC18.7■□□□□ 0.58
PCDH11XQ9BZA7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms