Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM54Q9BYV2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.58□□□□□ -0.07
TRIM54Q9BYV2 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TRIM54Q9BYV2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM54Q9BYV2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM54Q9BYV2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 AGGF1P1-201ENST00000509500 2073 ntBASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 AL512384.1-201ENST00000406683 331 ntBASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 TTTY23B-201ENST00000442790 549 ntBASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 AP001889.1-201ENST00000525414 633 ntBASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 AL596325.1-201ENST00000563991 1082 ntBASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 AC004466.1-201ENST00000599515 1080 ntBASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 AC138466.3-201ENST00000619983 221 ntBASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 FKBP4P6-201ENST00000457486 1332 ntBASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM54Q9BYV2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 POM121L8P-201ENST00000417732 1281 ntBASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 POM121L9P-203ENST00000441984 1285 ntBASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 INE1-201ENST00000456273 945 ntBASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 AL138709.1-201ENST00000614840 1693 ntBASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 CLUHP2-201ENST00000426660 1303 ntBASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 AC010327.5-201ENST00000586923 3061 ntBASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM54Q9BYV2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM54Q9BYV2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms