Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 KRT8P28-201ENST00000433288 1390 ntBASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 MIR602-201ENST00000384960 98 ntBASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 AC017081.1-201ENST00000420063 823 ntBASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 RN7SL452P-201ENST00000482923 291 ntBASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 AC010442.2-201ENST00000509301 407 ntBASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 IGHVII-74-1-201ENST00000517572 241 ntBASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 RN7SL460P-201ENST00000582806 258 ntBASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 AC015818.3-201ENST00000583797 589 ntBASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 PTMAP5-202ENST00000607242 1162 ntBASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 AC005786.4-201ENST00000623369 682 ntBASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 AP003400.6-201ENST00000624698 740 ntBASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 MIR941-1-201ENST00000636396 72 ntBASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 AC134043.2-201ENST00000624206 2238 ntBASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL25A1Q9BXS0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 LDHAL6FP-201ENST00000405916 1082 ntBASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 HLA-W-207ENST00000439514 771 ntBASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 HNRNPA1P3-201ENST00000440968 551 ntBASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 AC092473.1-201ENST00000441098 221 ntBASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 MTND4LP12-201ENST00000448237 295 ntBASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 AC104115.1-201ENST00000484005 623 ntBASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 AC008764.6-201ENST00000595909 2069 ntBASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COL25A1Q9BXS0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL25A1Q9BXS0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms