Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EBF4Q9BQW3 AGAP12P-201ENST00000585227 2359 ntBASIC14.36□□□□□ -0.11
EBF4Q9BQW3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 RPSAP43-201ENST00000402237 625 ntBASIC14.35□□□□□ -0.11
EBF4Q9BQW3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 AC125807.1-201ENST00000483097 614 ntBASIC14.35□□□□□ -0.11
EBF4Q9BQW3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 SPDYE22P-201ENST00000582158 798 ntBASIC14.35□□□□□ -0.11
EBF4Q9BQW3 AC004466.1-201ENST00000599515 1080 ntBASIC14.35□□□□□ -0.11
EBF4Q9BQW3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 BEND3P3-201ENST00000611030 2440 ntBASIC14.35□□□□□ -0.11
EBF4Q9BQW3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 LINC02486-201ENST00000604157 3000 ntBASIC14.35□□□□□ -0.11
EBF4Q9BQW3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 TUBB8P4-201ENST00000511806 1324 ntBASIC14.35□□□□□ -0.11
EBF4Q9BQW3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 AL445209.1-201ENST00000607269 3491 ntBASIC14.35□□□□□ -0.11
EBF4Q9BQW3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.35□□□□□ -0.11
EBF4Q9BQW3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 KRT18P13-201ENST00000400056 1290 ntBASIC14.34□□□□□ -0.11
EBF4Q9BQW3 AC211486.1-202ENST00000416371 468 ntBASIC14.34□□□□□ -0.11
EBF4Q9BQW3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 HLA-J-203ENST00000494367 1087 ntBASIC14.34□□□□□ -0.11
EBF4Q9BQW3 AC211476.1-201ENST00000503899 468 ntBASIC14.34□□□□□ -0.11
EBF4Q9BQW3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 AC103988.2-201ENST00000561804 725 ntBASIC14.34□□□□□ -0.11
EBF4Q9BQW3 AC036164.1-201ENST00000570544 333 ntBASIC14.34□□□□□ -0.11
EBF4Q9BQW3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.34□□□□□ -0.11
EBF4Q9BQW3 SRD5A3P1-201ENST00000603021 949 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms